Moritella sp. 36: HWV03_22000
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Entry
HWV03_22000 CDS
T08847
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
moq
Moritella sp. 36
Pathway
moq03420
Nucleotide excision repair
moq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
moq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HWV03_22000 (uvrD)
03430 Mismatch repair
HWV03_22000 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
moq03400
]
HWV03_22000 (uvrD)
Enzymes [BR:
moq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HWV03_22000 (uvrD)
DNA repair and recombination proteins [BR:
moq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HWV03_22000 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
HWV03_22000 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
AAA_12
DUF6689
Motif
Other DBs
NCBI-ProteinID:
QUM91244
LinkDB
All DBs
Position
complement(4928006..4930174)
Genome browser
AA seq
722 aa
AA seq
DB search
MDVSLLLDGLNDKQRDAVAAPQSSMLILAGAGSGKTRVLVHRLAWLMQVEQCSPYSLLAV
TFTNKAAAEMRGRVDKLLEGRQQGMWIGTFHGIAHRLLRAHHLDAGLPAEFQIIDSDDQL
RLLKRLIKAMNLDEKQWPAKQAMWYIGGKKDEGLRPEHLQAYDPIERTWIKIYQAYQESC
DRAGLVDFGELLLRSHELWLHKPHILAHYQDRFSNILVDEFQDTNNIQYAWLRMLTGDRG
NLMIVGDDDQSIYGWRGAQVANIQRFLTDFTGSKTIKLEQNYRSSSNILNAANALIVNNS
ERMGKELWTEDNEGEPISLYAAFNEVDEARFVVSRIKEWQDQGGSLSDCAILYRSNAQSR
VLEDALLQERLAYRIYGGLRFFDRLEIKDAMAYMRLKNNRDDDAAFERIVNKPTRGIGDR
ALSLLRDASREQGSTLWQAAIYLLDNNLIAGRAASSIRKFVELITQLDNDVAELALHEQI
DHVVLYSGLKSMYQLEKGEKAQSRIENLEELVSAARGFKIPDDSEEMTELSAFLAFAVLE
SAEGQADEFEDAVQLMTLHSAKGLEFPVVFMVGVEEGMFPSQQSTEEAGRMEEERRLCYV
GITRAMKKLYISYAESRRLYGKEMNHRPSRFIREVPEKYIEEIRLKTQIRQPTQFGRFSA
GSEKMSFESTGYQLGQRVLHAKFGEGIVMNYEGSGPQCRIQIEFDQLGSKWLVVSYARLQ
AL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatctctcttactggacggcctcaatgacaagcagcgtgatgctgttgctgca
ccacaatcgagtatgctgattttagcgggtgctggtagtggtaaaaccagagtattggta
catcgcttagcttggttaatgcaggtggagcagtgctcgccttattctttattagcggtg
acatttaccaataaagccgcagcagaaatgcgtggtcgtgttgataaattattagaaggt
cgtcagcaaggcatgtggatcggtactttccatggtatcgcgcatcgtctattacgcgcc
caccatttagatgctggcttacccgctgaattccaaattattgacagtgatgatcaactg
cggttattgaaacgtttgatcaaagccatgaaccttgatgagaagcagtggccggcaaaa
caagctatgtggtatatcggcggtaaaaaagatgagggcctgcgccctgaacacctacaa
gcgtatgatccgattgaacgtacctggatcaagatttatcaagcttatcaagaatcttgt
gatcgtgcaggcttagtcgatttcggtgagttgctattgcgttcgcacgaactttggctg
cacaaaccacatattttagcgcactaccaagatcgtttttctaacattctagtggacgaa
ttccaagataccaataatatccaatatgcgtggttacgtatgttgactggcgatcgtggt
aatttgatgatcgtaggtgatgatgatcagtccatttatggctggcgtggtgcacaggtc
gcgaatattcaacgcttcttaactgatttcacgggttctaaaacgattaaacttgaacaa
aactaccgttcgagcagcaatattttgaatgcggctaatgcgcttatcgtcaataacagt
gagcgtatgggtaaagagttatggactgaagataacgaaggtgaacctatctcattgtat
gccgcatttaatgaagtcgatgaggcgcgttttgttgttagccgaattaaagagtggcaa
gaccaaggtggttcactcagtgattgtgcgatcttatatcgtagtaatgctcaatctcgt
gtgcttgaggatgcgttattacaggaacgattagcttaccgtatttatggtggattacgt
ttctttgatcgtcttgaaattaaagatgcgatggcctacatgcgcttgaagaataatcgt
gatgatgatgcggcatttgagcgtattgttaataaaccgacgcgtggtattggtgatcgt
gctttatcgttattgcgcgatgccagtcgtgaacagggctcgacattatggcaagcggcg
atctatttactcgataacaatttgattgctggtcgggcggcgagttcgatccgtaagttt
gttgagttgatcacgcaattggataacgatgtggccgagcttgccctgcatgaacaaatt
gatcatgtggttttatactcagggctgaaatctatgtatcagcttgagaaaggtgaaaaa
gcccaatctcgtattgaaaacttagaggagctggtttctgctgcccgtggttttaagatc
cctgatgacagtgaagaaatgactgagttatctgcatttttagcctttgcggtattagag
tctgcagaaggacaggctgatgagtttgaagatgcggtgcaattgatgactttacactcg
gcgaaaggcttagagttccctgtggtattcatggtcggtgtcgaagaaggcatgttccca
agtcagcaatcgacagaagaagcagggcgtatggaagaagagcgccgtctttgttatgtg
ggtattacccgtgcgatgaagaagctatatatcagttatgcggagtcgcgtcgtttatac
ggtaaagagatgaatcaccgtccgtctcgtttcattcgagaagtacccgaaaagtatatt
gaagagattcgtttaaaaactcaaattcgccaaccaactcagtttgggcgttttagcgcg
ggttctgaaaaaatgtcatttgagtcgacaggttatcagttaggtcaacgtgtactgcat
gctaaatttggtgagggtattgtgatgaactatgaaggcagtggtccacaatgtcgtatt
caaattgagtttgatcaactgggcagtaaatggttggtagtttcttacgctaggttgcag
gctctatag
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