KEGG   Moritella sp. 36: HWV03_22135
Entry
HWV03_22135       CDS       T08847                                 
Symbol
rho
Name
(GenBank) transcription termination factor Rho
  KO
K03628  transcription termination factor Rho
Organism
moq  Moritella sp. 36
Pathway
moq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:moq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HWV03_22135 (rho)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:moq03021]
    HWV03_22135 (rho)
   03019 Messenger RNA biogenesis [BR:moq03019]
    HWV03_22135 (rho)
Transcription machinery [BR:moq03021]
 Prokaryotic type
  Bacterial type
   Other transcription-related factors
    Transcription termination factor
     HWV03_22135 (rho)
Messenger RNA biogenesis [BR:moq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     HWV03_22135 (rho)
SSDB
Motif
Pfam: Rho_RNA_bind ATP-synt_ab Rho_N NACHT AAA_25 OB_RNB AAA_22 S1CSD-TOTE-2 Mor AAA
Other DBs
NCBI-ProteinID: QUM91261
LinkDB
Position
complement(4954670..4955935)
AA seq 421 aa
MNLTELKNTPVSELVKLGESMGLENLARLRKQDIIFSILKAHAKSGEDIFGNGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVGGKIRPPKDGERYFALLKIDQVN
FDRPENSRNKILFENLTPIHPNERLRLERGNGSTEDITARILDLSAPIGKGQRGLIVAPP
KAGKTMLLQNIASSIALNHPDATLMVLLIDERPEEVTEMQRLVRGEVIASTFDEPANRHV
QVAEMMIEKAKRLVEHKKDVIILLDSVTRLARAYNTVTPSSGKILSGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALIDTGSKMDEVIYEEFKGTGNQELHLNRKIAERRVYPAIDF
TRSGTRREELLADKAELQKMWILRKIVHPMGEIDAMEFLIDKLAMTKTNDQFFEAMKKQK
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaatttaaccgaattaaaaaacacaccagtttctgaacttgtaaaactgggcgaatct
atgggtctagaaaatctggctcgcttaagaaaacaagacatcattttttctatcttaaaa
gctcacgcaaaaagcggcgaagacatttttggtaatggtgttttagagattttgcaggat
ggctttggtttcttgcgttcagcagacagctcttatcttgccggtcctgatgatatttat
gtctcgccaagtcagatccgtcgctttaacttgcgaacgggtgataccgttggtggtaaa
atccgcccgccaaaagatggcgaacgatattttgccttgttaaagattgaccaagttaac
tttgaccgtcctgaaaactctcgtaataaaatcctctttgaaaaccttactccaatccat
ccaaatgaacgtcttcgtttagaacgtggtaatggcagtaccgaagatatcactgcgcgt
attcttgatttaagtgcaccgattggtaaaggtcagcgtggtttaattgtggcaccaccg
aaagctggtaaaacaatgctattacaaaacattgcctcttcgattgcgttaaatcatcct
gacgcgacattgatggttctgcttatcgatgaacgtccggaagaagtaacagagatgcag
cgtttggttcgtggtgaagtaattgcttcaacatttgatgaacctgctaaccgacatgta
caagttgcggaaatgatgatcgaaaaagcgaaacgtcttgtcgagcacaagaaagacgtg
atcatcctacttgattctgtaacgcgtctagcacgtgcttacaatacggtaacgccatca
tcaggtaagatcttatctggtggtgttgatgctaatgccttacatcgtccaaaacgtttc
ttcggcgcagctcgtaacgttgaagaaggtggttctttaactatcatcgcaacagcattg
attgatactggttcgaaaatggacgaagtaatttacgaagaatttaaaggtactggtaac
caagagttacaccttaatcgtaaaattgcagaacgtcgtgtttatcctgcgattgacttt
actcgttcaggtacgcgtcgtgaagaactgttagcagataaagctgagctacagaaaatg
tggatcctacgtaaaatcgtgcacccaatgggtgagattgatgcgatggaattcctgatt
gataaactggctatgacgaaaacgaatgatcaattcttcgaagcaatgaagaagcaaaaa
tcataa

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