Methylobacterium oryzae: MOC_0938
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Entry
MOC_0938 CDS
T03299
Name
(GenBank) DNA topoisomerase IB (poxvirus type)
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mor03032
]
MOC_0938
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_0938
Enzymes [BR:
mor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MOC_0938
DNA replication proteins [BR:
mor03032
]
Prokaryotic type
DNA Topoisomerases
MOC_0938
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MOC_0938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AIQ88693
UniProt:
A0A089NS57
LinkDB
All DBs
Position
complement(929967..931220)
Genome browser
AA seq
417 aa
AA seq
DB search
MAGVETAENGGDLRAAAAEAGLVYVDDGRPGLSRRRSGSGFRYLDAKGAPVRDKAKLARI
RALAIPPAYTDVWICPRSNGHIQATGRDAKGRKQYRYHPDFRQAREADKFSRIMAFADAL
PGIRRRVDADMKRPGLPREKVLATVVHLLETTLIRVGNDDYARTNKSYGLTTLRDPHVRI
AGSALSFRFKGKSGKIWDVSLKDRRVARIVKACQDLPGQELFQYLDPDGTQRDVTSSDVN
AYLREITGEDFTAKDFRTWAGTVLAALALREFESFDSEAGAKRNIRAAIESVAGRLGNTP
TICRKCYIHPQILDCYLEGDLLLQVKGAVESELSEDLSRLRPEEAAVLGLLQARLSAAGD
SVRAGARVKPAGTRMRSSKKPRDKVAAPTTASKTSGMAETAPKAKRTSRVRRKAAAA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtgtcgagacggcggaaaacggcggagacctccgtgcggcggcggcggaggcc
ggcctcgtctacgtcgatgatggccggccgggcctgtcgcgccgccgcagcggctccggc
ttccgctacctcgacgcgaagggcgccccggtgcgcgacaaggcgaagctcgcccgcatc
cgcgcgctggcgatccctccggcctacacggatgtctggatctgcccccgcagcaacggc
cacatccaggcgaccggccgcgatgccaagggccgcaagcagtaccgctaccacccggat
ttccggcaggcgcgagaggccgacaagttctcgcggatcatggccttcgcggacgccctg
ccgggcatccgccggcgggtcgatgccgacatgaagcggccgggcctgccccgcgagaag
gtgctggccaccgtggtccacctgctcgagaccacgctgatccgcgtcggcaacgacgat
tacgcgcggaccaacaagagttacggcctgacgaccctgcgcgatccccatgtgcggatc
gcgggttcggccctgtcgttccggttcaagggcaagagcggcaagatctgggacgtgtcg
ctcaaggaccggcgcgtcgcccggatcgtgaaggcctgccaggacctgcctggacaggag
ctgttccagtacctcgatccggacggcacgcagcgcgacgtcacctcctcggacgtgaac
gcgtatctgcgggagatcaccggcgaggacttcaccgccaaggatttccggacctgggcc
ggtacggtgctggcggcgctggcgctgcgcgagttcgaaagcttcgacagcgaggcgggg
gccaagcgcaacatccgcgcggccatcgagagcgtcgccggccgcctcggaaacaccccg
acgatctgccgcaagtgctacatccacccgcagatcctcgactgctatctggagggtgac
ctgctcctgcaggtgaagggcgcggtcgagtccgagctgagcgaggatctctcccggctg
cggccggaggaggcggcggtgctggggctgctccaggcgcggctgtccgcggccggggat
agcgtccgggccggggcgcgggtcaagccggcgggaacgcgcatgcggagctcgaagaag
ccgcgggataaagttgcggcgccgacgaccgcttccaagacgtccggcatggccgagacc
gcgccgaaggccaaacggacttcccgggtccgcaggaaggctgcggctgcttag
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