Methylobacterium oryzae: MOC_1564
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Entry
MOC_1564 CDS
T03299
Name
(GenBank) Exodeoxyribonuclease V alpha chain
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mor
Methylobacterium oryzae
Pathway
mor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MOC_1564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_1564
Enzymes [BR:
mor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MOC_1564
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MOC_1564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
HHH_5
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
HHH_2
HHH
UvrD-helicase
HHH_3
PIF1
AAA_22
AAA_16
NTPase_1
nSTAND3
TrwB_AAD_bind
T2SSE
HerA_C
DEAD
AAA_29
Glyco_hydro_39
DUF8139
Motif
Other DBs
NCBI-ProteinID:
AIQ89319
UniProt:
A0A089Q445
LinkDB
All DBs
Position
1590155..1592356
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AA seq
733 aa
AA seq
DB search
MTDPGRSQQFGRGQPLEALAGTIERVTFHSPETGFCVLKVQARGKRDLVPVIGHAPAISA
GESITATGIWRTDRQHGLQFKADTLKVTPPTGTEGIEKYLASGHMRGIGPAMAKRIVAAF
GEGTFEIIEAEPGRLTEVEGIGPKRAARIVAGWAEQKAVREIMLFLHAHGVGTARAVRIF
KTYGHEAIAVMTEDPYRLARDIRGIGFKTADAIAMKLGLTKEAPQRLRAGISFALQTATD
AGHCALPVAELVALAVELLGVEAPLIRSALLDVLETGEVVQDVVGDKACIFLAGLHAAER
AIAERLRRRAPGMPPWPEIDLTRALPWVAEKTGKTLSPSQEAAVRLVLGAKLAVVTGGPG
VGKTSTLDTILRILRAKGVRILLAAPTGRAAKRMSEQTGLEAKTLHRLLEIDPKHGGFSR
NEENPLACDLLVIDETSMVDVPLMNALTKAVPDHAALLLVGDVDQLPSVGPGQVLADVIA
SGAVPVARLTEVFRQAAESRIVVNAHRINAGKMPEAAPRGTESDFHWIEINEPEPAVQTL
IEVVTRRIPARYGLDPVRDVQVLTPMQRGVLGARNLNHELQTVLNPNPPVSVERFGWRFS
PGDRVMESQNDYDREVFNGDLGTVAHIDNDEGAVIVEFEGREVIYPYGELDTLVPAYATT
IHKSQGSEYPAVVIPLAMQHWTMLARNLLYTGVTRGKRLVVVLGQRKAVAIAVRGGTMKP
RWTKLREWLAQRS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccagggcgctcgcagcagttcggacgtggccagccccttgaggcgttggca
ggcacgatcgagcgtgtcaccttccacagccccgaaaccggcttctgcgttcttaaggtc
caggcgcggggcaagcgcgacctcgtaccggtgatcggccacgcacccgcgatcagcgct
ggcgagtcgatcaccgcgaccggcatctggcgcacggaccgccagcacggcctgcagttc
aaggctgataccctcaaggtcacgccgcctaccggaacagagggcatcgaaaagtacctc
gcctcgggccacatgcgcggtatcggccccgccatggccaagcgcatcgtcgcggccttt
ggggaaggcacgttcgaaatcatcgaggccgagccgggccgcctcaccgaagtagagggc
atcggacccaagcgcgccgcccgcatcgtcgccggatgggccgagcagaaggccgtgcgc
gagatcatgctgttcctgcacgcccacggtgtggggacggccagggcagtgcggatcttt
aagacctacggccatgaggccatcgcggtcatgaccgaggatccctaccgtcttgccagg
gacatccggggcatcggcttcaagactgccgacgccatcgcgatgaagctcggcctaact
aaagaggcgccgcagcggctgcgggcagggatctcgttcgccctgcagactgccaccgat
gcgggccactgcgccctgcccgtggctgagctcgtggcgctggcggtcgagcttctcggc
gtggaggcgcctctgatacgctcggcactcctcgacgtgttggagaccggcgaggtcgtc
caggacgtcgtcggcgacaaggcctgcatcttccttgccggcctgcacgccgccgagcgc
gccatcgccgagcggctcaggcgccgcgcaccgggtatgccgccttggccggagatcgac
ctcacccgggcgctgccttgggtggcggagaagacgggcaagacgctctcgccctcgcag
gaggccgccgtgcgtctcgtgctcggtgcgaagctcgcggtggtcactggtggccctggc
gtgggcaagacctcgacactcgatacgatcctgcggatcctgcgagccaagggcgtgcgg
atcctgctcgccgctcccacgggccgggccgccaagcggatgagcgagcagaccgggctc
gaggccaagaccctgcatcgccttctcgagatcgaccctaagcacggtggcttctcgcgc
aacgaggagaatcccctcgcttgtgacctgctcgtcatcgacgagacttcgatggtcgac
gtgccgctcatgaacgcgctgaccaaggcggtgcccgaccacgcggcgttgctcctcgtc
ggcgatgtcgaccagctgccctcggttgggcccggtcaggtgctggccgacgtgatcgcc
tccggcgctgtgccggtggcccggctcacagaggtgttccgacaggcggcggagagccgg
atcgtggtcaatgcccaccggatcaacgcgggcaagatgcccgaggcggcaccgcgcggc
accgagagcgacttccactggatcgagatcaacgaacccgagccggccgtgcagacgctg
atcgaggtggtgacgcgtcggattcctgcccggtacggcctcgatccggtccgagacgta
caggtgctcaccccgatgcagcgcggagtgctgggcgcgcgcaacctcaatcacgaactc
cagacagtgctgaatccgaacccgccggtctcggtagagcggtttggatggcgcttctcg
cccggcgaccgggtgatggagagccagaacgactacgatcgggaggtgttcaacggcgac
ctaggaaccgtggcgcacatcgataacgacgagggcgccgtgatcgtcgagtttgagggg
cgggaagtgatctacccctacggcgagctggacacgttggtgccggcctacgccaccacg
atccacaaatcgcaagggtcggaatacccggcagtggtaatcccgctggccatgcaacat
tggacgatgctggcacgcaacctcctctatacgggcgtgacccgcggcaagcgtctggtg
gtggtgcttggccagcgcaaggcggtagccatcgcggtccggggcggcacgatgaagcct
cgctggacgaagcttcgagagtggctggcgcagcgctcttga
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