Methylobacterium oryzae: MOC_2885
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Entry
MOC_2885 CDS
T03299
Symbol
ihfB
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mor03032
]
MOC_2885 (ihfB)
03036 Chromosome and associated proteins [BR:
mor03036
]
MOC_2885 (ihfB)
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_2885 (ihfB)
DNA replication proteins [BR:
mor03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MOC_2885 (ihfB)
Chromosome and associated proteins [BR:
mor03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MOC_2885 (ihfB)
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MOC_2885 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
AIQ90640
UniProt:
A0A089NVR0
LinkDB
All DBs
Position
complement(2930982..2931293)
Genome browser
AA seq
103 aa
AA seq
DB search
MIKSELVLRIAEQNPHLYQRDVEILVNAILDTISDALARGDRVELRGFGAFSVKRREARR
GRNPRTGAAVAVSEKAIPVFKTGKEMRQRLNAAGIGENASAAE
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtcggagctcgtcctcaggatcgccgagcagaacccgcatctctaccagcgt
gacgtggagatcctggtcaacgcgatcctcgacaccatttccgatgcgctggcccgcggc
gaccgggtggaactgcgtggcttcggggccttctcggtgaagcgccgggaggcgcgtcgg
ggacgcaacccgcgcacgggtgccgccgttgccgtgtccgagaaggcaatccccgtgttc
aagaccggcaaggagatgcgccagcgcctcaacgccgccgggatcggcgagaatgcctcg
gccgccgagtag
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integrated database retrieval system
