Methylobacterium oryzae: MOC_3161
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Entry
MOC_3161 CDS
T03299
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mor
Methylobacterium oryzae
Pathway
mor03410
Base excision repair
mor03430
Mismatch repair
mor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MOC_3161 (recJ)
03430 Mismatch repair
MOC_3161 (recJ)
03440 Homologous recombination
MOC_3161 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_3161 (recJ)
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
MOC_3161 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
MOC_3161 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MOC_3161 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AIQ90916
UniProt:
A0A089NSM8
LinkDB
All DBs
Position
complement(3179917..3181734)
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AA seq
605 aa
AA seq
DB search
MSSAPLSVDPPPFLGVAASITGRRWQERCGGAAVQNHIAKMVQAHGLPELLARVLAGRGI
GPEAAPRHLAPRLRDLMPDPNTLLDMDAAVRRLVRAVRRGETVAVFGDYDVDGAASAALL
AGYLRGVGLRAPIHIPDRITEGYGPNIAAITALAADGATLLVCVDCGTSGHAPLEEAEKS
GLDVIVLDHHAASEVLPPARAVVNPNRLDDLSGLGHLCAAGIVFLTLVALNRALRLEGFF
GPDRPEPQLTDALDLVALATVADVVPLTGLNRAFVTQGLTVMRHRGRIGLAALLDAASLS
EPPESWHLGFVLGPRINAGGRIGDSALGARLLTTADPNEAARIAADLDRLNRERQAIEAQ
AVSEAEAEMDRALTLDPTRTVLVTASPEWHPGIVGLIASRLKERFNRPAFAFAIRPDGSA
TGSGRSIPGSDLGLAVRACVEAGIALKGGGHAMAAGVTVRTDDIPRFEAHLVMLLGASVT
VARAADALLIDGGLSAGGATAETVRLLQQAGPFGQGAPEPIFALGRHRLVDAGVVGSSHV
RARLRSRDGQAVGAICFRAAERPLGLALLNGIGRELHVAGTLSCDRWRGAERAQLRIVDL
APVDP
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
gtgtcatccgccccgctctccgtcgatccgccgcccttcctgggggtcgccgcctccatc
accggccggcgctggcaggagcgctgtggcggcgcggcggtccagaatcacatcgccaag
atggttcaggcccacggcctgccggaattgctcgcccgtgtgctggcagggcgcgggatc
ggtccggaggccgcgccgcgccaccttgcgccgcgtctgcgcgacctgatgccggacccg
aatacgctgctcgatatggacgccgccgtccgccgcctggtccgggccgtgcgccgcggc
gagaccgtggcggtcttcggcgactacgacgtggacggcgctgcgagcgcggccctgctc
gccggctacctgcgcggtgtgggcctgagggctccgatccacatccccgatcggatcacc
gagggctacggccccaacatcgctgcgatcaccgcattggcggcggacggcgcgacgctt
ctggtctgcgtcgattgcggcacgagcggccacgcgcctctggaagaagccgagaaatcg
ggcctcgacgtgatcgtcctcgaccatcatgcggcctccgaggtgctgccgccggcccgc
gccgtggtcaatcccaaccgcctcgacgacctgtcgggcctcggccatctctgtgccgcc
gggatcgtgttcctcaccctggtggcactgaaccgtgccctgcggctggagggcttcttc
gggccggaccgccccgaaccgcagctcaccgacgccctcgacctcgtagcgctggcgacc
gtggccgacgtcgtgcccctcaccggtctcaaccgggccttcgtgacgcagggcctgacg
gtgatgcgccatcgcggccgcatcggcctggcggccctgctggacgcggcctcgctgagc
gaaccgccggaatcgtggcatctcggcttcgtcctcgggccgcgcatcaatgccggtggc
cgcatcggcgattcggccctcggtgcccggcttctgacgacggcggacccgaacgaagcg
gcccggatcgccgccgacctcgatcgcctcaatcgcgagcgtcaggcgatcgaggcgcag
gccgtctccgaggccgaggccgagatggaccgtgccctgacgctcgacccgacccgcacc
gtgctggtcacggccagtcctgagtggcatcccggcatcgtcggactcatcgcgtcgcgc
ctgaaggaacggttcaaccgcccggccttcgccttcgcgatccgacccgacggcagcgcc
accggctcgggtcgctcgatcccggggtcagatctcgggcttgcggtgcgcgcctgcgtc
gaggccgggatcgccctcaaggggggcggacacgccatggcggccggcgtcaccgtacgg
accgacgacatcccccgcttcgaggcgcatctcgtcatgctgctgggggcgagcgtgacc
gtggcgcgggcggccgacgccctgctgatcgacggcggactcagcgccgggggcgctacc
gcggaaacggtccggctgctccagcaggccggaccgttcggacagggcgcgccggagccg
atcttcgccctcgggcgccatcgcctggtcgatgccggcgtggtcgggtcgagccatgtc
agggctcgcctgcgcagccgcgacggacaggcggtgggcgccatctgcttccgtgccgcc
gagcgccccctcggcctcgcgctgctgaacgggatcggtcgggaactgcacgtggccgga
acgctgtcctgcgaccgctggcgcggggccgagcgggcccagctccggatcgtcgatctg
gcgccggtggacccctga
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