Methylobacterium oryzae: MOC_3884
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Entry
MOC_3884 CDS
T03299
Symbol
addA
Name
(GenBank) Double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_3884 (addA)
Enzymes [BR:
mor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MOC_3884 (addA)
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MOC_3884 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
PDDEXK_1
UvrD_C_2
AAA_30
DUF6820
Motif
Other DBs
NCBI-ProteinID:
AIQ91639
UniProt:
A0A089QAL7
LinkDB
All DBs
Position
3894896..3898393
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AA seq
1165 aa
AA seq
DB search
MSSATSHAPAPFVVDDLTRANQRRAADPRASAWVSANAGAGKTKVLTDRVVRLLLDGAPP
GRILCLTFTKAAAANMAIRVFRLLGRWVTLDDETLAAELADLTGERAGPERLRLARRLFA
RAVETPGGLKIETLHALCERLLHMFPFEANVPARFVVLDETKAQELFDIEMANVLADAVA
NGDTPLSAALARITPEATGDTLRSAIRSAMRARSFIGDAAGLEKAFGRLHGALGLAPEDS
ADRIEAGILDGGTGCRPEDREALIAALRTGKANDEKLADALAAAEAERAGSADLPDRSEA
LALYRAVFFTQKDEPKADSRLGTKSVPADAKAALLAERDRLEPLFDRLRAARAHARTQAL
FRIAAEIHRRVEAQKARLGALDFDDLIHKALDLLGRVGAGWVLYKLDRGIDHVLVDEAQD
TNPEQWAILRAITEEFAAGEGARTGSRTRFAVGDPKQSIYGFQGAEPREFALTRASWIAE
SRSAGLTFEDVPLTLSFRSTDLVLRAVDAVFAIDAHNDGLSFEDTVRTTVHASARPGAPG
DVELWPIAEPEPAAEPDAWTAPVDAPETSAPAIVTARRVAQAVRTWTTTGDATGRIWRPG
DVLILVRKRGPAFEEVIRALKGLGVPVAGQDRLEVSAHIAVADLVAAGRAGLLPADDLTL
ATALKTPLVGLTDDDLVRIATRRDLAETLEDALHRHAASGDPAARRGLEALSGWIALAGL
HGPFGFYARLLGPQGGRAKLVARLGGEAGDAIDVFLAAAAQAETGEDAPSLGGFLARYVG
AEAGHTVKRDLESGRDEVRVMTVHGAKGLEAPVVVILDGCEPLGRNDPPLLPLPATEIAL
PPVWSGGRTQDCAATDAARAALLAKARQEHNRLLYVAMTRAADRLIVAPFRGHERESEAA
WCRMIHAGLEAALGAGRTLDLPYGPATFWQDGAPQMPAPAAAASAATRSPEPEPDWLRSP
VPPEPEVEALSPSGALRAADGARVPPPRLADAQARRRGILIHALLQHLPRVEPARREAAG
LAFVRSRAPGLPRAAPHAIVRSVLRIIDDPDLAPLFSPDARAEVALSGRVRAAGAERAVQ
GRVDRLAVTADVVRIADFKTGRPPEPDAPLPAAEAGQIALYARLLAQIYPGRTIQPILVW
TSGPVIRTLGPDDVAAALDRVGIEA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
ttgagcagcgccacttcgcacgcccccgcccctttcgtcgtcgatgacctcactcgcgcc
aaccagcggcgggcggccgatccgcgcgcctccgcctgggtctcggccaatgccggcgcc
ggcaagaccaaggtcctcaccgaccgggtggtgcggctgctcctcgacggtgccccgccc
gggcggatcctctgcctgaccttcaccaaggccgccgcggccaacatggcgatccgcgtc
ttccggctcctcggccgctgggtgacgctcgacgacgagaccctcgccgccgaactcgcc
gacctcaccggcgagcgcgccgggcccgagcgcctgcggctggcgcgccgcctcttcgcc
cgggcggtggagacgccgggcggcctcaagatcgagaccctgcacgccctgtgcgagcgg
ctgctgcacatgttccccttcgaggcgaacgtgccggcccgcttcgtggtgctcgacgag
accaaggcccaggagctgttcgacatcgagatggccaacgtgctggccgatgccgtggcg
aacggcgacacgcccctcagcgccgccctggcgcggatcacccccgaggcgacgggcgac
accctgcggtccgcgatccgttcggccatgcgggcccggagcttcatcggcgacgcggca
ggcctcgagaaggccttcgggcggctgcacggggcgctgggcctggcgccggaggattcc
gctgaccggatcgaggccgggatcctggacggcggcaccgggtgccgtccggaggatcgg
gaagcgctgatcgcggcactccgcaccggcaaggccaacgacgagaagctcgccgacgcc
ctggcggccgccgaggccgaacgggccggctccgcggatcttcccgaccggtccgaggcc
ctggccctctaccgcgcggtcttcttcacccagaaggacgagcccaaggccgacagcaga
ctcgggaccaagagcgtgccggccgatgccaaggcggcgttgctcgccgagcgggatcgg
ctggagccgctgttcgaccgcctgcgcgccgcccgggcccatgcccggacgcaggccctg
ttccggatcgccgccgagatccaccgccgcgtggaggcccagaaggcgcgcctcggcgcc
ctcgatttcgacgacctgatccacaaggcgctggatctgctcgggcgggtcggggccgga
tgggtcctctacaagctcgatcgcgggatcgaccacgtcctggtcgacgaggcgcaggat
acgaatccagagcaatgggcgatcctgcgggcgatcacggaggaattcgccgccggcgag
ggcgctcggaccggcagccgcacgcgcttcgcggtgggcgatcccaagcagtcgatctac
ggcttccagggtgcggagccgcgggaattcgccctgacccgcgcatcctggatcgcggaa
tcgcgctcggccgggctgaccttcgaggacgtgccgctcaccctgtcgttccggtcgacg
gacctcgtgctgcgcgccgtcgacgcggtcttcgccatcgatgcgcacaatgacggcctg
tccttcgaggacacggtgcgcacgaccgtgcatgccagcgcccgacccggggcgcccggc
gacgtggagctgtggccgatcgccgagccggagcccgccgccgagccggatgcctggacc
gctcccgtcgacgcgccggagaccagcgccccggcgatcgtcacagcccgccgggttgcg
caggcggtgcggacttggaccacgacgggggacgccaccggtcggatctggcgccccggg
gacgtcctaatcctggtccggaagcgcgggcccgccttcgaggaggtgatccgcgccctg
aagggactgggcgttccggtcgccgggcaggaccggctggaggtctccgcccatatcgcg
gtcgccgatctggtcgccgccgggcgggcgggtctcctgccggccgacgacctgaccctc
gccaccgccctcaagacgccgctcgtcgggctgaccgacgacgacctcgtgcggatcgcc
acccgccgcgacctcgcagagactctggaggacgccctgcaccgccatgccgcctccggc
gacccggccgcaaggcgcgggctcgaggccctgtcggggtggatcgcgctggccgggctc
cacggcccgttcggcttctacgcgcggcttctcgggccgcaggggggccgggcgaagctt
gtggcccgtctcggcggcgaggcgggggacgccatcgacgtgttcctcgcagccgccgcc
caggccgagaccggcgaggacgcgccgtccctcggcggcttcctcgcccgctacgtcggt
gccgaggccggtcacaccgtcaaacgcgacctcgaatcgggccgcgacgaggtccgggtg
atgacggtccacggcgcgaagggtctggaggcgccggtcgtggtgatcctcgacggctgc
gagcccctgggccgcaacgatccgcccctcctgccgctcccggcgacggagatcgccctg
ccgccggtctggtcgggcgggcggacccaggattgcgccgccaccgacgccgcgcgggcg
gccctgctcgcgaaggcccggcaggagcacaaccgcctgctctacgtcgccatgacccgc
gccgccgaccggctcatcgtcgcgcccttccgcggccacgagcgcgagagcgaggcggcg
tggtgccggatgatccatgccggcctcgaggcggcgctcggggccggccggacgctggac
ctgccctacggaccggcgacgttctggcaggatggcgccccgcagatgccggccccggcg
gcggcggcctccgcggctacgcggtctccggagccggagccggactggctgcgcagcccg
gtcccgccggaaccggaggtcgaggccctgagcccgtccggcgcactccgggcggcggac
ggcgcgcgcgtaccgccgccgcgcctcgcggacgcgcaggcccggcggcgcgggatcctg
atccacgccctgctccagcacctgccccgcgtggagcccgcccgccgggaagcggccggg
ctcgccttcgtgcggtcccgggcgcccggcctcccgcgcgcggccccgcacgcgatcgtc
cggtcggtccttcgaatcatcgatgacccggatctcgcacctctcttcagtccggatgcc
cgcgccgaggtggccctgtcggggcgtgtccgggcggccggcgcggagcgcgcggttcag
ggacgcgtcgatcgcctcgcggtgacggcggacgtcgtccgaatcgcggatttcaagacc
ggccgcccgcccgaacccgacgcccccctccccgcggcggaggccggccagatcgccctc
tatgcgcgccttctcgcgcagatctatccgggccggacgatccagccgatcctcgtctgg
acctcgggcccggtgatccgcaccctcggccccgacgacgttgcggcggcactggaccgg
gtcggcatcgaggcgtga
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