Methylobacterium oryzae: MOC_4057
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Entry
MOC_4057 CDS
T03299
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mor
Methylobacterium oryzae
Pathway
mor03030
DNA replication
mor03410
Base excision repair
mor03420
Nucleotide excision repair
mor03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOC_4057
03410 Base excision repair
MOC_4057
03420 Nucleotide excision repair
MOC_4057
03440 Homologous recombination
MOC_4057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mor03032
]
MOC_4057
03400 DNA repair and recombination proteins [BR:
mor03400
]
MOC_4057
Enzymes [BR:
mor01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOC_4057
DNA replication proteins [BR:
mor03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MOC_4057
DNA repair and recombination proteins [BR:
mor03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
MOC_4057
NER (nucleotide excision repair)
GGR (global genome repair) factors
MOC_4057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Taq-exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AIQ91812
UniProt:
A0A089NWR2
LinkDB
All DBs
Position
complement(4060546..4063692)
Genome browser
AA seq
1048 aa
AA seq
DB search
MTDAKPEIKSVGPGDQVILVDGSSFIFRAYFQSINQDQKYNSRPSDGLPTGAVRLFCTKI
AQFLQDGAAGTMPTHLGIVFDKSEGSFRKEMFPDYKGHRPDAPDDLKRQMPLMRDAVRAF
GLHAVELERYEADDLIATYTRQAEARGAGVIIVSSDKDLMQLVGPQVRFYDFESGAKGKP
GYRPERNLDVEAIIAKWEGLQPNQIGDALALIGDTSDNVPGVPGIGLKTAAALIKEFGSL
EALLERAGEIKQPKRRETLLANVDQAKLSRKLVALMEDVPVPVPLDELGVPKPDPEKLVG
FLKAMEFNTLTRRIAQMLHVDPEAVKPDPRLLPGARPHGYGNGAGGSVAVPFFGDSVPPD
PETAAAGAERPPGAAPPEGGAVDPFADLNLPDAPAKPRAPVEATPGNVVAARAAEAVAPF
DTAAYETVTSLEQLDAWIAEAEEAGVIAVDTETDALDAHKAGLVGVSLAVSTGRACYIPL
AHVQAAKVQADATDLFGEGAAPSDVVEPVPGQIPLKDAVARLKPLLENPGVLKVGQNLKY
DWVVLARYGVEVAPFDDTMLISYVLDAGKGGHGMDELARRHLGHQPITFSDVAGTGRNKV
SFDRVAIDKATAYAAEDADVTLRLWRMMKPRLVAEHRVAVYETLERPLLPVIARMEQRGI
RVDRDMLSRLSGDFSQILVRLEEEIQEDAGEKFSVGSPKQIGDILFGKMGLPGAKKTPSG
QWATPATLLEELAQAGHELPKKILEWRQLSKLKSTYTDSLQTHADRETARVHTSFSLAAT
TTGRLSSSEPNLQNIPIRTEEGRRIRRAFVAAPGNRLISADYSQIELRLLAHMADIPELR
KAFADGIDIHAATASAMFGVPLKDMTPDLRRRAKTINFGIIYGISAFGLADRLGIGREEA
SAFIKQYFEQFPGIRDYIDATKKSCRDKGYVTTLFGRVCHYPQIRSNNPSERASVERQAI
NAPIQGSAADIIRRAMTRMEGALADEKLGVRMLLQVHDELVFEAAEDEVERAIPIIRGVM
EEAPAPALTLRVPLVVEANAAGNWQEAH
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgaagcccgaaattaagtccgtgggccccggcgatcaggtgatcctggtc
gacggctcgtcgttcatcttccgggcctatttccagtcgatcaatcaggaccagaagtac
aattcgcgcccctccgacgggctgcccaccggcgccgtgcggctgttctgcacgaagatc
gcgcagttcctgcaggacggcgccgccggcacgatgccgacgcatctcggcatcgtcttc
gacaagtcggaagggtcattccgcaaggagatgttcccagactacaagggccaccgcccg
gacgcgcccgacgacctcaagcggcagatgcccctgatgcgcgacgcggtgcgggccttc
ggcctgcacgcggtggagctggaacgctacgaggccgacgacctcatcgcgacctatacc
cgccaggccgaggcgcggggcgcgggcgtcatcatcgtctcctccgacaaggatctgatg
cagctcgtgggaccgcaggtgcggttctacgatttcgaatccggtgcaaagggcaagccg
ggctaccggcccgagcgcaacctcgatgtcgaggcgatcatcgccaagtgggaggggctt
caacccaaccagatcggcgacgcgctggcgctgatcggcgacacctccgacaacgtaccg
ggcgtccccggcatcggcttgaagaccgccgcggcgctgatcaaggagttcggcagcctc
gaggcgctgctggagcgggcgggcgagatcaagcaacccaagcgccgggaaaccctgctc
gccaacgtcgatcaggctaagctgtctcgaaaactcgtggcgctgatggaggatgtgccg
gtcccggtgccgctcgacgaactcggcgtgccgaagcccgacccggagaagctcgtcggc
ttcctgaaggcgatggagttcaacaccctgacgcgccgcatcgcccagatgctgcacgtc
gaccccgaggcggtgaagcccgatccgcggctcctgcccggcgcccggccgcacggctac
ggcaacggggccggcggcagcgtcgcggtgccattcttcggcgattctgtgccgccggat
cccgagaccgcggcggccggggccgagcgcccgccgggcgccgcaccgcccgagggcggc
gcggtggaccccttcgcggatctcaacctgccggacgcgcccgccaagccccgggccccc
gtcgaggcgacgcccggcaacgtcgtggcggcccgggccgcggaggccgtggcccccttc
gacaccgccgcctacgagaccgtcacgtctctggagcagctcgacgcctggatcgccgag
gccgaggaagccggtgtgatcgcggtcgacaccgagacggacgcgctcgacgcccacaag
gccggcctggtcggcgtatcgctggcggtgtccacgggacgggcctgctacatcccgctg
gcgcacgtgcaggccgccaaggtgcaggccgacgccaccgacctgttcggcgaaggggcc
gcgccctccgacgtggtcgagccggtcccgggccagatccccctgaaggatgccgtcgcc
cgactgaagccgcttctggagaatcccggcgtcctgaaggtcggccagaacctcaaatac
gattgggtcgtgctcgcccgctacggcgtcgaggtggcgcccttcgacgacacgatgcta
atctcctacgtcctcgatgccgggaagggcgggcacggcatggacgagctggcccggcgc
catctcggccaccagccgatcaccttctcggacgtggccggcaccggccgcaacaaggtg
agcttcgaccgggtcgcgatcgacaaggccaccgcctacgcggccgaggatgcggacgtg
acgctccgcctgtggcggatgatgaagccgcgcctcgtcgccgagcaccgggtcgcggtc
tacgagaccctggagcgcccgctcctgccggtcatcgcccggatggagcagcgcggcatc
cgggtcgaccgggacatgctgagccgcctctcgggggatttctcgcagatcctcgtgcgc
ctggaggaggaaatccaggaggatgccggcgagaaattctcggtgggctcgccgaagcag
atcggcgacatcctgttcgggaagatgggcctgccgggcgccaagaagacgccctccggc
caatgggccacaccggccacgctcctcgaagaactggcccaggccgggcacgaactgccc
aaaaagatcctggagtggcgccagctctcgaagctgaaatccacctatactgactcgctc
cagacccatgcggatcgcgagaccgcgcgggtccacacctcgttctcgctggcggcgacc
actacgggtcggctgtcctcctccgagccgaacctgcagaacatcccgatccgcaccgag
gagggccggcgcatccgccgcgccttcgtggccgcgcccggcaaccggctgatctcggcg
gattattctcagatcgagctgcgtctcctggcccacatggccgatatcccggaactccgg
aaggcgttcgcggacgggatcgacatccacgcggccaccgcctcggcgatgttcggcgtg
ccgctcaaggacatgacgcccgacctgcggcgccgggcgaagaccatcaatttcggcatc
atctacggcatctcggccttcgggctcgccgaccggctcggcatcggccgcgaggaggct
tccgcgttcatcaagcagtatttcgagcagttccccgggatccgcgactacatcgatgcg
accaagaagagctgccgggacaagggctacgtcaccaccctgttcggccgggtgtgccac
tatccgcagatccgctccaacaacccgtccgagcgcgccagcgtcgagcggcaggcgatc
aacgcgccgatccagggctcggccgccgacatcatccgccgggccatgacccggatggaa
ggggctttggccgacgagaagctcggggtgcgcatgctcctgcaggtccacgacgagctg
gtcttcgaggctgccgaggacgaggtggagcgggcgatcccgatcatccgcggcgtgatg
gaggaagcgccggcgccggccctgacgctgcgggtgccgctggtggtggaggccaacgcg
gcggggaactggcaggaggcgcattag
DBGET
integrated database retrieval system
