Methylobacterium oryzae: MOC_4251
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Entry
MOC_4251 CDS
T03299
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mor
Methylobacterium oryzae
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mor03016
]
MOC_4251 (truB)
Enzymes [BR:
mor01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MOC_4251 (truB)
Transfer RNA biogenesis [BR:
mor03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MOC_4251 (truB)
Prokaryotic type
MOC_4251 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIQ92006
UniProt:
A0A089NVP0
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All DBs
Position
complement(4270092..4270979)
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AA seq
295 aa
AA seq
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MILDKHVGMTSTHAVAVVKRAFNAKKAGHAGTLDPLASGILPIALGEATKTVPFVMDGRK
AYRFTVQWGIETDTDDAEGRPVATSETRPDRAAVEAALPAFVGAIEQVPPRYSAIKIQGE
RAYDLAREGEVVELVARPVQIDRLAVVEHDGERTVIEAECGKGTYVRALARDLGRMLGCY
GHVAALRRTRVGPFSEAEACPVSALTDGSPEAALAYLRPVETALDAIPEVAVSRDLGLRL
MRGQPVILRGRDAPVEGKAFATCAGILVAVGDVERGELIPHRVFHLGGTAPGRSA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
gtgatcctcgacaagcatgtcggcatgacctcgacccatgcggtcgcggtggtgaagcgc
gccttcaacgccaagaaggcgggccatgccggcaccctcgatccgctggcctccggcatc
ctgccgatcgccctcggcgaggcgaccaagaccgtcccgttcgtgatggacggccggaag
gcctatcggttcaccgtgcagtggggcatcgagaccgataccgacgatgccgaggggcgt
cccgtggccaccagcgagacccgcccggaccgtgcggcggtcgaggccgcgctcccggcc
ttcgtgggcgccatcgagcaggtgccgccgcgctactcggcgatcaagatccagggcgag
cgcgcctacgacctcgcccgcgagggcgaggtggtggaactcgtggcccggccggtgcag
atcgaccggctcgcggtggtcgagcatgacggcgagcgcaccgtgatcgaggcggagtgc
ggcaagggcacctacgtgcgggcgctggcccgcgacctcggccggatgctcggctgctac
ggccacgtggcggccctgcgccggacccgtgtcggtcccttctccgaggccgaggcctgc
ccggtctcggccctgaccgacggcagcccggaggcggcgctcgcctatctgcgtccggtg
gagacggccctcgacgccatcccggaagtcgcggtctcccgtgatctgggcctgcgcctg
atgcggggccagccggtgatcctgcggggccgggacgcccccgtcgagggcaaggccttc
gcaacctgtgctggcatcctggtcgccgtcggcgatgtggagcgcggcgaactgatcccg
caccgggtgttccacctcggcggcacggctcctggccgcagcgcctga
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