Methylobacterium oryzae: MOC_5903
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Entry
MOC_5903 CDS
T03299
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mor
Methylobacterium oryzae
Pathway
mor00300
Lysine biosynthesis
mor00470
D-Amino acid metabolism
mor01100
Metabolic pathways
mor01110
Biosynthesis of secondary metabolites
mor01120
Microbial metabolism in diverse environments
mor01230
Biosynthesis of amino acids
Module
mor_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mor00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
MOC_5903 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
MOC_5903 (dapF)
Enzymes [BR:
mor01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
MOC_5903 (dapF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
Pro_racemase
CntK_N
OrfX-like
Motif
Other DBs
NCBI-ProteinID:
AIQ93658
UniProt:
A0A089P6I3
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All DBs
Position
5903760..5904647
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AA seq
295 aa
AA seq
DB search
MSALAHRRFLKMHGAGNAIVVLDLRGSTVTVRPEEARAIAQDPGSAFDQLMVLHDPVSPG
TDAFLRIYNTDGSESGACGNGTRCVAYAMLDDPAMARPAEGGRLTLETEAGVLGVRRVSE
RAFTVDMGRPRLAWDEIPLSEPFPDTRRIELQIGPIDDPILHSPGAVNMGNPHAVFFVEQ
DPDSFDLARIGPMLENHPLFPERANISVAQVTGRETIKLRVWERGAGLTLACGTAACATV
VAASRLKMIGRQAQVALPGGELFIEWRADDHVLMTGPVALVAEGTLAPELFDSAA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcactcgcccacagacgcttcctgaagatgcacggcgccggcaacgcgatcgtg
gtgctggacctgcgcggctccaccgtgacggtgcggcccgaggaggcgcgggcgatcgcg
caggatcccggctcggccttcgatcagctgatggtgctacacgatcccgtgagcccgggc
acggacgcgttcctgcggatctacaacaccgacggttcggaatcgggcgcctgcggaaac
ggcacgcgctgcgtcgcctacgcgatgctcgacgatccagccatggcccggccggccgag
ggcgggcggctcaccctggagaccgaagcgggcgtgctcggcgtgcgccgcgtctcggag
cgggccttcacggtcgatatgggccggccgcgtctcgcctgggacgagattcccctgtcg
gagcccttcccggacacgcgccggatcgagttgcagatcggcccgatcgacgatccgatc
ctgcactcgccgggcgcggtgaacatgggcaacccgcacgcggtgttcttcgtggagcag
gatccggattccttcgacctcgcgcggatcggtccgatgctggagaaccacccgctgttc
ccggagcgcgccaacatctccgtggctcaggtgacgggccgcgagacgatcaagctccgc
gtctgggagcgcggcgccgggctgacgctcgcctgcggcaccgccgcctgcgccaccgtg
gtggccgcctcgcgcctcaagatgatcggccggcaggcccaggtcgcgctgcccggcggc
gagttgttcatcgagtggcgcgccgacgaccatgtcctgatgaccggtccggtcgcgctc
gtcgccgaggggaccctggcgccggagctgttcgacagcgcggcctga
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