Moraxella sp. FZFQ2102: NGM44_03705
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Entry
NGM44_03705 CDS
T10719
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mora Moraxella sp. FZFQ2102
Pathway
mora03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mora00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NGM44_03705 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mora03021
]
NGM44_03705 (rpoB)
03400 DNA repair and recombination proteins [BR:
mora03400
]
NGM44_03705 (rpoB)
Enzymes [BR:
mora01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NGM44_03705 (rpoB)
Transcription machinery [BR:
mora03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NGM44_03705 (rpoB)
DNA repair and recombination proteins [BR:
mora03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NGM44_03705 (rpoB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
BSH_YknX
OB_RNR_2nd
Motif
Other DBs
NCBI-ProteinID:
USZ15497
LinkDB
All DBs
Position
complement(777183..781274)
Genome browser
AA seq
1363 aa
AA seq
DB search
MAYSYTEKKRIRKSFSRLPDVMDVPYLLAIQVDSYEQFLQEHKKPKARANVGLQAAFSSI
FPIESHSGNAQLQFVEYYLGEPEFDERECIMRGSTFAAPLRVKIRLVIKDKENKTAIKDV
REQSVYMGEIPLMTDNGTFIINGTERVIVSQLHRSPGVFFDHDKGKSHSSGKVLYNARII
PYRGSWLDFEFDVKDLVYARIDRRRKLLATIILRAIGMDTQQILDAFFEKVEVFKGSESF
EIELIADRLKGEMAQFDIVSPDGKVIVEQGQRINARRIKQIVESGMTKLAVPDEYLYERI
IGEDIVVNDEVIVRANSLIDHDTLVKLAEKNVQSFKILFTNDIDHGSFIADTLRADTVLT
REEALIEIYKVMRPGEPPTLETAEKLFESMFFSQERYDLSNVGRMKFNRRLGRDFVDTDD
IDVQREQGVLSNADIVDVLKELIEIRNGRGEVDDIDHLGNRRIRSVGEMTENQFRIGLAR
VERAVKERLTTADSDNLSPQDLINSKPVAAAIKEFFGSSQLSQFMDQNNPLSEITHKRRV
SALGPGGLTRERAGFEVRDVHTTHYGRVCPIETPEGPNIGLINSLAVFAKTNNFGFLETP
YRRVIDGRVTDEIDYVSAIEEVGMVIAQADSPMNENGELTEEMVMVRYHGESVRMSADKV
THMDVSPRQVVSVAASLIPFLEHDDANRALMGSNMQRQAVPTLRSDKPLVGTGMERHVAR
DSGVCVVAKRGGVIEEVDASRIIVRVNESEMTAGEAGIDIYNLIKYTRSNQNTCINQRVI
VNEGDQIARGDILADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILLSERVVQEDRFTT
IHIQELTCVARDTKLGPEEITGDIPNVGEAALANLDEAGIVYIGAEVDAGDILVGKVTPK
GESQLTPEEKLLRAIFGEKAADVKDTSLRVPSSTKGTVIDVQVFTRDGLEKDSRAKSIEK
AMLDNYRKDLKEELVIFEAAAKGRILSLLDGKKVSGGAGFKAGTVLALADIENLPLETLL
DIQPAEEEVSERLGQIAEFLSDKQKDIDNKFAEKKRKLTQGDDLAHGVQKIVKVYLAVKR
RIQPGDKMAGRHGNKGVVSRIMPVEDMPYDENGKPVDIVLNPLGVPSRMNIGQVLETHLG
MAAKGLGDKIDGMLRAQASIAELRDFLDKIYNKVGGEQVDLDSLSDEDLLALAQNLRAGV
PMGTAVFDGAKETQIKELLSLAGLSTTGQQTLYDGRTGKKFDRPVTVGYMYMLKLNHLVD
DKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGATYTLQEMLTVKSDDVEG
RTRMYKNIVDGEQYMNPGMPESFNVLTKEIRSLGINIDLKEKK
NT seq
4092 nt
NT seq
+upstream
nt +downstream
nt
atggcatattcttataccgaaaagaaacgcattcgtaaaagtttttcaaggctccctgat
gtcatggatgtgccgtatctgctcgccatccaagtggattcttatgagcaatttttgcaa
gagcacaaaaagcctaaggcgcgtgccaatgtcggcttgcaagcggcgttttcttcgatt
ttcccaatcgaaagccattctggtaatgcgcagctgcagtttgttgaatattatttaggc
gagcctgagttcgatgagcgtgagtgcatcatgcgtggctcgactttcgcagcaccattg
cgcgtgaaaattcgccttgtcatcaaagacaaagaaaataaaaccgccatcaaagatgtc
cgcgaacaaagcgtctatatgggcgaaatcccattgatgactgacaacggcactttcatc
atcaacggtactgagcgtgtcatcgtatcgcagctgcatcgttcaccgggtgtgttcttc
gatcacgacaagggtaaatcacattcaagcggtaaagtgctgtacaatgcacgcatcatt
ccttaccgtggttcatggttagatttcgaatttgatgtaaaagacctagtatatgcgcgt
atcgaccgccgtcgtaagctacttgcgaccatcattctgcgcgcgatcggcatggataca
cagcaaatccttgatgcattctttgaaaaagtagaagtgttcaaaggttcagaatcattt
gaaattgaactgattgctgatcgtctaaaaggtgagatggcacagtttgacatcgtatca
ccagatggtaaagtgatcgtcgaacaaggtcagcgtatcaacgcgcgccgcatcaagcaa
atcgttgagtctggcatgaccaagcttgctgtacctgatgagtacctgtatgagcgcatc
atcggtgaagacatcgtcgttaatgatgaagtcatcgttcgtgccaacagcctaatcgat
catgacacgctggtgaaattggctgagaaaaatgttcagtcgttcaaaatcttatttacc
aatgacatcgatcatggttcattcatcgccgatactttgcgcgcggacactgtcttgaca
cgcgaagaagcattgattgaaatttataaagttatgcgtccaggtgagccaccaacgcta
gaaaccgctgaaaagctatttgaatcaatgttctttagccaagagcgctatgatctatca
aatgtcggtcgtatgaagtttaaccgccgtctaggccgtgattttgttgatactgatgat
atcgatgtacagcgtgagcaaggcgttctatctaatgccgacatcgttgatgtactaaaa
gagctgattgagattcgcaacggtcgtggcgaagtcgatgacattgaccacttgggtaac
cgccgtatccgctcagtgggtgagatgaccgaaaaccaattccgcattggtttggctcgt
gttgagcgtgcagtaaaagagcgcctaacgacagcagattctgacaatctatcgccacaa
gatttgatcaactcaaaaccagttgcggcagccattaaagaattctttggctcaagccag
ctgtctcagttcatggaccaaaacaacccattgtctgagattactcataagcgtcgtgta
tcagcgcttggcccaggtggcttgacccgtgagcgtgcaggctttgaagtgcgtgacgta
cataccacgcattatggtcgtgtgtgtccgattgaaacgcctgaaggtccaaacattggt
ttgatcaactcattggcggtatttgccaaaaccaataacttcggtttcctagaaacgcca
tatcgccgcgttatcgacggtcgcgtaaccgatgagattgattatgtctcagcgatcgaa
gaagtgggcatggtgattgcacaggctgactcgccgatgaacgaaaatggcgagctgacc
gaagagatggtcatggtgcgttatcatggcgaatcggtgcgtatgagcgcggataaagtg
actcatatggatgtttcgccacgccaagttgtctcagtggcagcaagcttgattccattc
cttgagcatgacgatgcgaaccgtgcattgatgggttcgaacatgcagcgtcaggctgta
cctactttgcgttcagacaagccattggtgggtactggtatggaacgccatgttgctcgt
gactcaggcgtgtgtgtggttgctaagcgtggcggtgtgattgaagaagttgatgccagc
cgtatcatcgtgcgtgtcaatgaaagtgagatgactgctggtgaagcgggtattgatatc
tataacttgatcaaatacactcgttcaaaccaaaacacctgtatcaaccaacgcgtcatc
gtcaatgaaggcgaccaaattgcgcgtggcgatatcctagcggacggcccatcgactgac
ctaggcgagttggcgcttggtcaaaatatgcgcgtggcgttcatgccttggaatggctac
aacttcgaagactccatcttgctatctgagcgtgtggtacaagaagatcgtttcactacc
attcacatccaagagctgacttgtgtggcgcgtgataccaagctcggccctgaagaaatc
actggcgatattccaaacgttggtgaagcagcacttgctaaccttgacgaagcgggtatc
gtgtatatcggtgctgaagtggatgcaggcgatatcttggtgggtaaagtcacaccaaaa
ggcgaaagccaattgacaccagaagaaaagctgcttcgtgcaatcttcggtgaaaaagcg
gcagatgtcaaagatacatcactgcgtgtaccatcatcaaccaagggtaccgtcatcgat
gtacaagtcttcacccgtgatggtctagaaaaagacagtcgtgctaagtctatcgaaaaa
gcgatgctggataattaccgcaaagacttaaaagaagagttggtgatttttgaagcagcg
gcaaaaggccgtatcctaagcctgcttgacggcaaaaaggtttcaggcggtgcaggcttt
aaggcaggtactgtattggcacttgctgatatcgagaacctaccgctagaaactttgctt
gacattcagcctgctgaagaagaagtatcagagcgtctgggtcaaatcgctgaattccta
agcgataagcaaaaagatatcgacaacaaatttgctgagaaaaaacgtaaattgacccaa
ggcgatgatttggcacatggtgtccaaaaaatcgttaaggtgtatttggctgtcaagcgt
cgcattcagcctggtgataagatggcaggtcgtcatggtaacaagggtgttgtctcgcgc
atcatgcctgtagaagatatgccttatgacgaaaacggcaagccggtggatatcgtacta
aacccactgggcgtaccatcgcgtatgaacatcggtcaggtacttgagacgcatctaggt
atggcggcaaaaggcttgggcgataagattgatggtatgctacgtgcccaagcaagcatc
gctgagctgcgtgatttcttggataagatctataacaaagttggcggtgagcaagttgat
ctagacagcttgtctgatgaagatttgctggcattggctcaaaacttgcgcgcaggcgta
ccaatgggtactgcggtctttgatggtgctaaagaaacccaaatcaaagagctactaagc
ctagcaggtctatcgaccacaggtcagcaaaccttgtatgacggccgtactggtaagaaa
tttgaccgtcctgtgactgtcggctatatgtatatgctgaagctgaaccacttggtagat
gataagatgcacgcgcgttcgactggttcgtactcgctagtcactcagcaaccacttggt
ggtaaagcgcagttcggtggtcagcgtttcggtgagatggaagtctgggcactagaagcg
tatggcgcaacttatacacttcaagagatgctgacagtcaagtcggacgatgtcgaaggc
cgtacccgtatgtataagaacatcgttgatggtgaacaatacatgaacccaggtatgcca
gagtcgttcaatgtcttgaccaaagagattcgctcgctgggtattaacattgacttaaaa
gaaaagaaataa
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