Moraxella sp. FZFQ2102: NGM44_06805
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Entry
NGM44_06805 CDS
T10719
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mora Moraxella sp. FZFQ2102
Pathway
mora03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mora00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGM44_06805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mora03019
]
NGM44_06805
03009 Ribosome biogenesis [BR:
mora03009
]
NGM44_06805
Enzymes [BR:
mora01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NGM44_06805
Messenger RNA biogenesis [BR:
mora03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NGM44_06805
Ribosome biogenesis [BR:
mora03009
]
Prokaryotic type
rRNA processing factors
NGM44_06805
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
FAM186A_PQQAQ
Dna2
Motif
Other DBs
NCBI-ProteinID:
USZ14106
LinkDB
All DBs
Position
complement(1459180..1462857)
Genome browser
AA seq
1225 aa
AA seq
DB search
MKRILINATHNEEIRVALCKDNHLYDFDLENRTREQKKANIYKGHITRVEPSLEAAFVEY
GSARQGFLPLREIASEYLHGNLREDNIKQLIKEGDEVIVQVEKEERGNKGAALSTFISLA
GRYLVLMPNNAKAGGISRQISGKVREEMKQIIAGLNLPKGMSVIVRTAGLGKGAEDLQND
LDHLLDIWKSIQEQNKNRPSPCLVHQEAGVVTRAVRDYLRDDIGEVWIDSENAYNEAANF
ISAVMPAQMSKLRKYTEYEPMFARFGIERQIETAYQREVRLPSGGSIVIDQTEALVSIDI
NSSKSTKGSDVAETAYHTNLEAADEIARQLRLRDMGGLIVIDFIDMNDPRHQKDVEKRLV
EATRHDRARVQFAEISKFGLMEMSRQRLRPSLEEATGYICPRCHGNGMIRDLRSLSLSIM
RQIEQIALKERMGEIQAEVPTDIAAFLLNEKRESLVYLEQDSGARITILPHAHLESPNFS
LHFNPDGFAPSSYERIADTEEKETVDRGYEVNWQSDNDGKDGARWHKASDKGDKKAAKAE
PEQAKPTKTEPQAVAWLSNLFAPKPQAQLAGSLGTTDAASAIEALVNSGGVSLGAAGNIN
AIIETATQPEKEARSHDDRRKKPKHKKEVEEKDTAEKVEKAEKTDRKAKKDKPTEQHPKR
EAGSRRESRGEIARGETLTAKSDKHDKADKAEKKERTDKPKADKAERPARQKPSDPNEVV
LHVSATKEEAVATQVVHLSLDGSKPKKARTKADKTEHKAEKTEHPNDTVKSATADVVDAA
VSESVQESVQDAPIQSTADTAPVTVLDSDNEAVAKPEAIEPTPVADAAPAAEPKPAIDPV
LSARIAALAKEMNKAVNDPRVVQAALQAPAAPIRGTAGEFIASVLGANASGQFVADFIAA
VAKSQGATTALDFGSYFSNYGYAPMTDVAKAEFDKLTQADAQASAPQGKTAVAPRPIARR
AANDPRGQHPDFIEPSDMAADEVAEVVATDTAVETVADYPTKTAETSTQAVEAVSQTDNS
ETAETVGETVVHLVDDAIDVAKLTAEQVSDTVSEVVSETLDNVATIATAAMDLFAHLGDD
NAAAEAIATDAVETEPTRSDVQVETVEATETQAVEITETTENSEALEITETTEQAEKKVS
QIKEITAEQKAEKKSKASSYKDMIENVAGQLQPQVGILNLMTAKAPKTPKAPKTRTPRKP
SKKPKVEVRKISKTTETAEPTDTSE
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcattttaatcaacgccacgcacaacgaagaaattcgtgtggcactgtgcaaa
gacaatcacctgtacgatttcgacctagaaaatcgtacgcgtgagcagaaaaaagccaac
atctacaaaggacacatcacccgtgtcgagccgtcgctagaagcggcgtttgtcgagtat
ggttctgcgcgccaaggctttttgcccctacgagaaatcgccagcgaatatctgcatggc
aatctccgcgaagacaacatcaaacagctgatcaaagaaggcgatgaagtcatcgttcaa
gtcgaaaaagaagagcgcggcaacaaaggcgcagcgttatcgacttttatctcgcttgct
ggtcgctatctggtattgatgccaaacaacgccaaagcaggcggtatcagccgtcagatc
tcaggcaaagtccgcgaagagatgaaacaaatcatcgcagggctaaacctaccaaaaggc
atgagcgtcatcgtgcgcactgcaggtcttggcaagggtgctgaagatctacaaaacgac
cttgatcatctgctggacatctggaaatccatccaagaacaaaacaaaaaccgcccaagc
ccttgccttgtccaccaagaagcgggcgtggtgacgcgtgcggtgcgcgactatctgcgc
gatgacatcggcgaagtgtggatcgacagcgaaaatgcttacaacgaagcggcgaacttc
atcagcgcggtgatgccagctcagatgagcaaactgcgtaaatacactgagtatgagccg
atgtttgcacgctttggcatcgaacgccaaatcgaaaccgcctatcagcgcgaagtgcgt
ctgccatcaggaggctcgatcgtcatcgatcagaccgaagctttggtgtcgatcgacatc
aactcatcaaaatccaccaaaggctcggatgtcgccgagaccgcttatcatactaaccta
gaagcggccgatgagatcgcgcgtcagctgcgtctgcgtgatatgggcggcttgatcgtc
attgactttattgacatgaacgatccgcgccaccaaaaagatgtcgaaaaacgcttggtc
gaagccacgcgccatgaccgtgcgcgcgtgcagtttgctgagatcagtaaatttggcctg
atggaaatgagccgccaacgcctgcgcccatcgttagaagaagccacaggttacatctgc
ccacgctgtcatggcaatggtatgatccgcgatttgcgctcattatcactatcaatcatg
cgccaaatcgaacaaatcgctctaaaagaacgcatgggtgaaatccaagctgaagtaccg
accgacattgcggcattcttattgaatgaaaaacgcgaaagcttggtgtatctagagcaa
gacagtggcgcgcgcatcactatcttgccgcatgcacacctagaaagcccgaatttcagc
ctgcatttcaatcctgacggctttgccccatcaagctatgagcgcatcgccgataccgaa
gaaaaagaaactgttgatcgtggctatgaagtcaattggcaaagcgataatgatggcaag
gatggcgcacgctggcacaaagcaagcgacaaaggtgataaaaaagccgccaaagccgag
ccagagcaagccaaaccaaccaagacagaaccacaagctgtggcatggctgtcaaatcta
ttcgcaccaaaaccacaagcccaactggccggcagcctaggcacgaccgatgctgcgtct
gccatcgaagccttggtcaatagtggtggtgtcagcctaggcgcagcaggcaatatcaat
gccatcatcgaaactgccacgcagcctgaaaaagaagcgcgcagccacgatgaccgccgc
aaaaaacctaagcacaaaaaagaagttgaagaaaaagacaccgctgagaaagtagaaaag
gcagaaaaaaccgaccgcaaagccaaaaaggataagccaaccgagcaacatcctaagcgc
gaagcaggctcacgccgcgagtcacgtggtgaaatcgcacgcggcgagaccctaaccgct
aagagcgacaagcatgataaagcagacaaagcagagaaaaaagagcgcaccgataagcca
aaagcggacaaggcagaacgccctgcacgccaaaagccaagcgatccaaatgaagtcgtg
cttcatgtcagcgccaccaaagaagaagcggtagcaacgcaagtggtgcatctgtcactt
gatggcagtaagccaaaaaaagcacgcactaaggcggacaagactgagcataaagctgag
aaaaccgaacatccaaatgatactgtcaagtctgccacagctgatgtagtagatgcagca
gtcagcgaatctgtgcaagaatcagtacaagatgcaccaatccaaagcactgctgatacc
gcacctgtcactgtgcttgatagcgataacgaagctgtagctaagcctgaagctatcgag
cctacaccagtggctgacgctgcgcctgcggcagagcctaaacctgcaatcgatcctgta
ttgagcgcacgcatcgcagcacttgccaaagagatgaacaaggcagtgaacgatccacgc
gttgtgcaagcagccctgcaagcccctgcagcaccaattcgcggcacagcaggtgagttc
atcgcaagtgtcttgggtgctaatgccagcggtcaattcgtcgctgatttcatcgctgca
gtcgcaaaatcacaaggcgcgaccaccgcccttgacttcggcagctactttagcaactat
ggttatgcgccgatgacagatgtcgccaaggcagagtttgacaagctgacccaagcggac
gcgcaagcatctgccccacaaggcaaaactgctgtcgcaccgcgtccgatcgcgcgccgt
gctgccaatgacccacgcggtcaacatcctgatttcatcgagccaagcgacatggcagcc
gatgaagtcgcggaagtggtagctactgataccgctgtagaaactgtggcggattatcct
accaaaactgctgaaactagtacccaagctgtggaagcagtcagccagactgataatagc
gaaaccgctgaaacggtcggtgaaacggttgtacacttagtcgatgatgccatcgatgtc
gcaaaactcaccgccgagcaggtctcagataccgtcagcgaagtggtgagtgagactttg
gataatgtcgctaccatcgcaactgctgctatggatctgttcgcccatctaggtgatgat
aatgcagcagctgaagccattgcgactgatgctgtagaaactgagccgacacgcagtgat
gttcaagtagaaacggttgaagccactgaaactcaagctgtagagattaccgaaactaca
gaaaatagcgaagcgctagagatcaccgaaaccactgagcaagctgagaaaaaggtcagt
cagatcaaagaaatcaccgccgaacaaaaggcggagaaaaaatctaaggcaagcagctac
aaagacatgatcgaaaatgtcgctggtcagctgcagccacaggttggtattctaaaccta
atgaccgccaaagcaccaaagaccccaaaagctccgaaaacgcgcacaccgcgcaaaccg
agcaaaaaaccaaaggtcgaagtgcgtaaaatcagcaaaaccaccgaaactgctgagccg
actgatacttctgaataa
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