KEGG   Marasmius oreades (fairy-ring mushroom): 66070311
Entry
66070311          CDS       T08156                                 
Symbol
SMD2
Name
(RefSeq) mRNA splicing protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66070311 (SMD2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:more03041]
    66070311 (SMD2)
   03032 DNA replication proteins [BR:more03032]
    66070311 (SMD2)
Spliceosome [BR:more03041]
 Complex A
  U1 snRNP components
   Sm proteins
    66070311 (SMD2)
  U2 snRNP components
    66070311 (SMD2)
 Complex B
  U1 snRNP components
    66070311 (SMD2)
  U4/U6.U5 tri-snRNP components
    66070311 (SMD2)
 Complex C
  U2 snRNP components
    66070311 (SMD2)
DNA replication proteins [BR:more03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     66070311 (SMD2)
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 66070311
NCBI-ProteinID: XP_043015850
UniProt: A0A9P7V317
LinkDB
Position
1:3560723..3561444
AA seq 111 aa
MSQYVHVPKSELDEAQLRQLEEHEISQGPLSVLQQAVRNHAQVLISLRNDKKLLARVKAF
DRHSNMVLENVKEMWTEIPKGKNKKPVNKDRFISKMFLRGDSVILILRNQA
NT seq 336 nt   +upstreamnt  +downstreamnt
atgagtcaatacgtccatgtaccaaaatccgagctagacgaggctcagcttcgacaattg
gaagaacacgaaatctcgcaaggcccattgtcagttcttcaacaagcggtccgcaaccac
gctcaagtcctcatttccctgcgaaatgacaagaaactccttgccagggtgaaggctttc
gacaggcatagtaatatggtacttgaaaatgtgaaagagatgtggacagaaataccaaag
ggaaagaacaagaagccagtaaataaggaccggttcatcagcaaaatgtttttacgcggt
gactcggtcatcctcatcttgcgaaatcaagcatga

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