Marasmius oreades (fairy-ring mushroom): 66070740 Help Entry 66070740          CDS       T08156                                  Name (RefSeq) uncharacterized protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism more  Marasmius oreades (fairy-ring mushroom) Pathway more03018   RNA degradation Brite KEGG Orthology (KO) [BR:more00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     66070740  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:more03019]     66070740 Enzymes [BR:more01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      66070740 Messenger RNA biogenesis [BR:more03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      66070740   mRNA degradation factors    3'-5' decay     Ski complex      66070740 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk ResIII Helicase_C DEXQc_Suv3 ATPase_2 Motif Other DBs NCBI-GeneID:  66070740 NCBI-ProteinID:  XP_043016328 UniProt:  A0A9P7V403 LinkDB All DBs Position 1:4583800..>4588770 Genome browser AA seq 1236 aa AA seqDB search MDSEEQIGLINQILYPRPENASALLERLGIANLPSRDAVLREIENKFLLPQDELPSHWLP KYQVHWERDVDVPSLLPTAPSAPPTTLSFIRAGLEGRVVGYSEAPTPSMSSGRTSTSMER APGPSTNFVRGKSGYVPFWPGGLDDIVSDPAIALNSAIGGKNGLRTIPPGFSRGLRLPGD DVEDDVLIHELDEMRGSGENAPLDQTQDRGRHIVLDDEPVFLPAGNETEIDDLLPTTRSH LITVKSGKRGSSKNQKRDWAHVIDVKTPLTNFHELVPNMARKYPFELDTFQKHAVYHLEK GDSVFVAAHTSAGKTVVAEYAIALAEKHMTRAIYTSPIKALSNQKFRDFKQTFSSTSVGI LTGDVQINPEASCLIMTTEILRSMLYKGADLIRDVEFVIFDEVHYVNDAERGVVWEEVII MLPDHVNIILLSATVPNSKEFAEWVGRTKKKNIHVISTAQRPVPLEHYLYAGRDLFKIVD ANRKFLSQGYKDAVESLRRKQDKEREAAGIPPVQRVGARGAAPRGGRAGVPARGGRGGSA GSSSRTMHTGADKNLYVHLVALLKKKNLLPVVVFTLSKKRCEENASTLTNQDLCTAVEKS EVHVAIEKALSRLKGSDRKLPQIARMRDLLSRGIGVHHGGLLPIVKELVEILFARGLVKI LFATETFAMGVNMPAKCVVFSGIRKHDGRSFRDILPGEYTQMAGRAGRRGLDPTGTVIIV TTDSLPEQGTLNTMILGTPGKLSSQFRLTYNMILNLLRVEALKVEEMIKRSFSENASQQL LPEQQRKIIQGEKDLLAMKKLECDVCNPDIEQFYDLNAEIAELNSKLLEMSSTHPHGVKS YQSGRVVILRDEHFDTNALAVLLKPGLPETGTSKKVKTYLVLGVVDEGKKFSRNKDKDPR AIPPRWPPELRLLNVEKPTYELRTVPLSSIAMVTDQVIQVDMNAVVERRRISSLNQTVSR LLDVLSDWKSIGFIPEVAWGKMRMLEFQETLIGRDSLVGRLEGKVCVLCEHFNEHYAATH AEKVLRENIANLKLVISDQNLELIPDYEQRIEVLKELKFIDENSTVLLKGRVACEINSAN ELILTELILENALAIYEPEEVVALLSCFVFQEKTDVEPVIPPKLEQGRDAINAISQKVGR LQDKNKVAAEESRSKLNFGLAEVVYEWAKGMPFEQITALTDVPEGTIVRVITRLDETCRE VRDAARVIGDAELFKKMEESQIKIKRDIVFAASLYF NT seq 3711 nt NT seq  +upstreamnt  +downstreamnt atggacagcgaggagcagataggactcatcaaccaaatcctgtatccacgcccagaaaac gcgtcggcgctcctggagcggctcgggattgcaaacctaccttcaagagacgcagttctt cgagagattgaaaacaaatttttactacctcaggacgaacttccttcacattggttgcca aaatatcaggttcactgggaaagagatgtcgacgtaccatcactcttacccacagccccg tccgcacctccaaccactttgtcttttattcgcgctggacttgaaggacgcgtcgtggga tacagcgaggcccctacgccatcgatgtcgtctggccggacctcaacgtctatggaacgt gcaccaggtccgagtaccaacttcgttcgaggaaagtcaggctacgttcctttctggccc ggcggattggacgacatagtttccgatccggccattgctctaaactctgccattggtgga aagaacggattacgcaccatccctccagggttctcccgaggactccgcttgcctggcgac gacgtcgaggatgatgtacttatccacgagctcgatgagatgcgaggatccggagaaaat gcgccactcgaccaaacgcaagaccgcggccgacacattgttctcgatgatgagccggta ttcttaccagcaggcaatgagacagaaatagacgatctactaccaacgacgaggtcgcat cttatcaccgtcaagtcaggcaaacggggctcatcgaagaaccagaaacgcgattgggca catgttatcgatgtgaaaactcctttgacgaatttccatgagctagtgcccaacatggcc cgcaagtacccctttgagctagacaccttccagaagcatgctgtctatcaccttgagaaa ggtgattcagtcttcgtggctgcccacacatctgctggtaaaactgtcgtggctgagtat gcaatcgcactcgccgagaagcacatgacacgcgcgatatacacgtccccgatcaaggct ctctccaatcaaaagtttcgtgatttcaaacagacgttctcatccacatctgttggtatc ttgacgggagatgtccaaataaatcctgaggctagctgtctcatcatgaccacggaaatt ctacgaagtatgttatacaaaggtgccgatttgattcgggacgtggagttcgtgattttt gatgaggtccactatgtaaatgacgccgagagaggtgttgtttgggaggaggttattatt atgcttcctgatcatgtcaacatcattcttttatcagccacagttcccaattccaaagag tttgctgaatgggttgggcgaaccaagaaaaaaaatatacacgttatttcgactgcccaa cgccccgtccctctcgagcattacctttatgcagggcgagacttattcaaaattgttgat gccaatagaaaatttctcagtcaaggatataaggacgctgttgaatccttacggcggaaa caggacaaagaaagggaagcagcaggtataccccccgttcaacgtgttggcgcaagaggt gcggcaccgcgtggtggtcgagcaggcgttcctgcacggggtggacgaggtggtagtgcg gggtcgtcatccagaacgatgcataccggtgctgacaagaatctgtatgttcatctggtt gcgctgttaaagaagaagaatttattacccgtggtggtgttcacgctgtcgaagaaacgt tgcgaggaaaatgcttctactttgacaaatcaggatctatgtactgcagttgagaagagc gaagtgcacgttgccatcgagaaagcattgtctcgtctcaaaggttccgataggaaactc ccccaaattgctcgtatgcgagatctgttgagtcggggtattggtgtacatcatggtggt ctgttacccattgttaaagagctcgtggagattctatttgctcgaggactcgtaaaaata ctattcgctactgagaccttcgcgatgggggtcaatatgccagcgaaatgcgtggtattt tctgggatacgaaaacacgatgggcgtagttttcgagatatcctaccaggggaatatacc caaatggctggtcgcgccggtcgccgtggtttggatccgacaggaactgtgatcattgtt acgaccgattctcttcctgaacaagggacactaaacaccatgatactgggaaccccggga aagttgtcctcgcaattcaggctaacgtacaacatgattctcaaccttcttcgagtagag gctcttaaagttgaggagatgatcaagcgaagcttctcggagaacgcctcgcagcaactc ttacctgaacaacaaagaaagattattcagggcgagaaagacctgttggcgatgaagaaa ttggagtgcgacgtctgcaaccccgacattgagcaattctacgatttaaacgcagagata gcagaactcaactcgaagcttttggaaatgtcttcaacccatcctcacggtgtcaaatcc tatcagagtggcagagttgtcatcttacgagatgagcattttgataccaatgcattggcg gtattgctgaaacctggacttcccgagaccggcacgtcgaagaaagtcaagacgtactta gtactgggtgtcgttgacgaaggcaagaagtttagccgtaataaggacaaggatccccga gccattccgcctcgttggcctccagaactcaggttgctcaatgttgagaaacccacctac gagctacgaaccgtcccgctttctagtatcgcaatggtcaccgatcaggtaattcaggtg gatatgaacgcagttgtggaaaggcgccgtatctcctcgttgaatcaaaccgtgtcgcgc ttgctagatgtactttctgattggaaaagtattggcttcataccggaagtcgcatggggg aaaatgcgcatgctagagttccaagaaactctgatcggcagagattctctagtgggtcga ctggaagggaaggtttgtgttttgtgtgaacatttcaacgaacattatgctgccactcat gcggagaaagttctccgtgaaaatattgcaaacctaaagttggttatttcggatcagaac ctggagcttataccagattacgaacaacgtattgaggtccttaaagagctcaaattcatt gacgaaaattctacggttcttttgaaaggtcgtgtagcttgcgagattaattcagccaac gagttgatattgactgagttaattttggaaaatgccctcgctatttatgagccggaagag gttgttgccctcttgtcgtgttttgtcttccaggagaagacggatgttgaaccagtcatc cctcccaagctagaacaaggccgagacgccatcaatgccatcagccagaaggttggtcgt cttcaagacaagaataaagtagcggcggaggagtcacgatcgaagctgaattttggactt gctgaagtggtttacgaatgggcaaagggaatgccgtttgaacaaatcactgcactgacc gacgttccagagggtaccattgtcagagtcataacacgtctggatgaaacctgtcgcgaa gtcagagatgcagcccgggtgataggtgacgcagagctgtttaagaagatggaagaatcg cagatcaaaatcaagagagatatcgtctttgctgcaagtctgtatttttga

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