Marasmius oreades (fairy-ring mushroom): 66070819
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Entry
66070819 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12878
THO complex subunit 1
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03013
Nucleocytoplasmic transport
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66070819
09122 Translation
03013 Nucleocytoplasmic transport
66070819
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
66070819
03041 Spliceosome [BR:
more03041
]
66070819
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
66070819
Spliceosome [BR:
more03041
]
Complex C
Other components
EJC/TREX
66070819
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
66070819
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
CCDC28
Motif
Other DBs
NCBI-GeneID:
66070819
NCBI-ProteinID:
XP_043016420
UniProt:
A0A9P7V455
LinkDB
All DBs
Position
1:complement(4778108..4780861)
Genome browser
AA seq
728 aa
AA seq
DB search
MSAVSLEPVLTSLIASIPTSPVHEEQLKQLVKKTLDDAKRISSPENRKNQWEYLLRNEVL
NLAATEGQALKNEETRYYDQLRDMLDLVLKFTELDACEQSFPFTVLQDLLEAQTIASCSH
TFTWIETRASRLTEGMVPGKGKALVLLRTLNDLLRRLSKMGTMTIFCGRILTFLSGVFPL
GERSGVNLRGEYGPLWEGVTMEAKEESSSAGADQAKVEDSNGDMKMQVDSKDPKKDDKAA
EQKMDFYNTFWSLQRPFSRPPLFANPATFPDFKEAVTKVLPVIKEASAKERLMMGSKAVG
ASNGSLKRKREPLESAEDAVEEYFFAKFLTSPELIDLEIADTHFRRQFLFQLLILLSHLL
NYTKAAKAAWQTTRNRSLQMDFVLSDTDAQWVQETFTKAMEELRQTTPNGRAFADTAAVI
LERDRNWIRWKNDMCPPFDKAPWSVEIEEEEEVDGEKQKKRKVGLEEATREARQKMREPP
EDWQWKFGSEALTEIWEMGYRDLHDLQRPFHPGDIQDFAKKIQLEDRRIEMRTKQLRQQQ
ERREAFKMAAAAKAAEAEAAEMESKATTTNLEPPTDTISAQNVSSPLHPSLPAKPVSSSL
PQEPPSVGTPASTVGPSAAPVTSTPTPRPATPMSAPLPPDDQIKKAEESKERWSWLALRT
AREQYLSHFGKVGTGDVPALVQEIEREKEKEAKETKASESPSGSSPSKSPGPETLKVDVE
GDIKMEAT
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcggtttccctcgaaccagtacttaccagcctcattgcctcaattcctacttcc
ccggtccatgaagaacagctcaaacaactcgtaaagaaaactcttgatgatgcaaaaagg
atctcttcaccggagaacaggaaaaatcaatgggaatacctgttgaggaatgaggtcttg
aatcttgctgcaactgagggccaagctctcaagaatgaagagacgagatactatgaccag
ctgcgagatatgttggacctggttctcaagttcacggagttggacgcatgcgaacaaagc
tttccgttcacggtcctacaggatctccttgaagcgcaaacaatcgcctcatgctcccat
acattcacatggattgaaacacgcgcctcacgtttaacagaaggcatggttcccggaaaa
ggaaaggccctcgtacttttacgaacattgaatgatttacttcgtcgcctttcaaagatg
gggaccatgacaatattttgtggaaggatactcacgttcttgagtggggtgttcccgtta
ggtgaacgcagtggcgttaatctgaggggtgaatatggtcctttatgggagggggtgaca
atggaggcgaaagaagagtcttcatcagcaggagcggatcaagccaaggtcgaggactct
aatggtgacatgaagatgcaggtcgattccaaagatccaaagaaagacgacaaggcagct
gaacaaaaaatggatttttacaatacattctggtccctacaacgaccgttctccagaccg
ccactgttcgcgaatccagccaccttccccgatttcaaagaagccgtcactaaggttcta
cctgtaatcaaagaagctagtgcgaaggaacgtttgatgatgggtagcaaggcggttggc
gcatcaaacggatcactcaaacgcaaacgagaacccttagagagcgccgaagatgctgtc
gaagaatatttctttgcaaaattcttgaccagtcctgaactgattgatcttgagatcgca
gatacccatttccgccgtcaatttctctttcaactgctcattttactgtcacatcttctt
aattacaccaaggctgccaaggctgcgtggcagacgacaaggaatcgctcgttacaaatg
gacttcgttctatctgatacagatgcacaatgggtacaagaaacatttaccaaggcaatg
gaagagttgcgacagacaacgccgaacggacgagcgttcgctgatacagctgcggtcatt
ttggagcgcgacaggaactggatccggtggaagaacgacatgtgtccgccgtttgacaaa
gcaccctggagcgtcgagatcgaggaggaagaggaggttgatggagagaaacagaagaag
agaaaggttggtctggaagaggctacgagagaagcaagacagaagatgcgcgaacctcct
gaggattggcagtggaaattcgggagtgaggcattgaccgagatatgggagatgggctat
cgtgacttgcacgatttacaaagacctttccatcctggcgatatccaagactttgccaaa
aagattcaactcgaagataggcgaatagaaatgcgaacaaaacaactcagacaacagcaa
gagagacgagaagcatttaagatggcagcggcggccaaagcagcagaggcggaggcagcg
gagatggagtccaaggctactaccacaaatttagagccacccacagacacaatctcggca
caaaatgtgtcatcaccacttcatccttcacttccggccaagcctgtttccagctctttg
cctcaagagcctccatcagttggtacacctgcatcaacggtggggccatctgcagcgccg
gtcacaagtacgccgacgcccaggccagcaactcccatgtctgcgccgttacctcctgac
gatcagataaagaaagcggaagagagcaaggaacgctggtcatggctggcgctccgaacg
gcccgtgagcagtatttatcacattttggaaaggttgggactggagatgttccggccctg
gtccaggagatcgagcgagagaaggagaaagaggcaaaagaaaccaaggcatctgaatcg
ccgagtgggagtagtccttcgaaatcgccaggaccagaaactctgaaagttgatgtagaa
ggggatataaagatggaagcaacgtag
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