KEGG   Marasmius oreades (fairy-ring mushroom): 66070819
Entry
66070819          CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K12878  THO complex subunit 1
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03013  Nucleocytoplasmic transport
more03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66070819
  09122 Translation
   03013 Nucleocytoplasmic transport
    66070819
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    66070819
   03041 Spliceosome [BR:more03041]
    66070819
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     66070819
Spliceosome [BR:more03041]
 Complex C
  Other components
   EJC/TREX
    66070819
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    66070819
SSDB
Motif
Pfam: efThoc1 CCDC28
Other DBs
NCBI-GeneID: 66070819
NCBI-ProteinID: XP_043016420
UniProt: A0A9P7V455
LinkDB
Position
1:complement(4778108..4780861)
AA seq 728 aa
MSAVSLEPVLTSLIASIPTSPVHEEQLKQLVKKTLDDAKRISSPENRKNQWEYLLRNEVL
NLAATEGQALKNEETRYYDQLRDMLDLVLKFTELDACEQSFPFTVLQDLLEAQTIASCSH
TFTWIETRASRLTEGMVPGKGKALVLLRTLNDLLRRLSKMGTMTIFCGRILTFLSGVFPL
GERSGVNLRGEYGPLWEGVTMEAKEESSSAGADQAKVEDSNGDMKMQVDSKDPKKDDKAA
EQKMDFYNTFWSLQRPFSRPPLFANPATFPDFKEAVTKVLPVIKEASAKERLMMGSKAVG
ASNGSLKRKREPLESAEDAVEEYFFAKFLTSPELIDLEIADTHFRRQFLFQLLILLSHLL
NYTKAAKAAWQTTRNRSLQMDFVLSDTDAQWVQETFTKAMEELRQTTPNGRAFADTAAVI
LERDRNWIRWKNDMCPPFDKAPWSVEIEEEEEVDGEKQKKRKVGLEEATREARQKMREPP
EDWQWKFGSEALTEIWEMGYRDLHDLQRPFHPGDIQDFAKKIQLEDRRIEMRTKQLRQQQ
ERREAFKMAAAAKAAEAEAAEMESKATTTNLEPPTDTISAQNVSSPLHPSLPAKPVSSSL
PQEPPSVGTPASTVGPSAAPVTSTPTPRPATPMSAPLPPDDQIKKAEESKERWSWLALRT
AREQYLSHFGKVGTGDVPALVQEIEREKEKEAKETKASESPSGSSPSKSPGPETLKVDVE
GDIKMEAT
NT seq 2187 nt   +upstreamnt  +downstreamnt
atgtccgcggtttccctcgaaccagtacttaccagcctcattgcctcaattcctacttcc
ccggtccatgaagaacagctcaaacaactcgtaaagaaaactcttgatgatgcaaaaagg
atctcttcaccggagaacaggaaaaatcaatgggaatacctgttgaggaatgaggtcttg
aatcttgctgcaactgagggccaagctctcaagaatgaagagacgagatactatgaccag
ctgcgagatatgttggacctggttctcaagttcacggagttggacgcatgcgaacaaagc
tttccgttcacggtcctacaggatctccttgaagcgcaaacaatcgcctcatgctcccat
acattcacatggattgaaacacgcgcctcacgtttaacagaaggcatggttcccggaaaa
ggaaaggccctcgtacttttacgaacattgaatgatttacttcgtcgcctttcaaagatg
gggaccatgacaatattttgtggaaggatactcacgttcttgagtggggtgttcccgtta
ggtgaacgcagtggcgttaatctgaggggtgaatatggtcctttatgggagggggtgaca
atggaggcgaaagaagagtcttcatcagcaggagcggatcaagccaaggtcgaggactct
aatggtgacatgaagatgcaggtcgattccaaagatccaaagaaagacgacaaggcagct
gaacaaaaaatggatttttacaatacattctggtccctacaacgaccgttctccagaccg
ccactgttcgcgaatccagccaccttccccgatttcaaagaagccgtcactaaggttcta
cctgtaatcaaagaagctagtgcgaaggaacgtttgatgatgggtagcaaggcggttggc
gcatcaaacggatcactcaaacgcaaacgagaacccttagagagcgccgaagatgctgtc
gaagaatatttctttgcaaaattcttgaccagtcctgaactgattgatcttgagatcgca
gatacccatttccgccgtcaatttctctttcaactgctcattttactgtcacatcttctt
aattacaccaaggctgccaaggctgcgtggcagacgacaaggaatcgctcgttacaaatg
gacttcgttctatctgatacagatgcacaatgggtacaagaaacatttaccaaggcaatg
gaagagttgcgacagacaacgccgaacggacgagcgttcgctgatacagctgcggtcatt
ttggagcgcgacaggaactggatccggtggaagaacgacatgtgtccgccgtttgacaaa
gcaccctggagcgtcgagatcgaggaggaagaggaggttgatggagagaaacagaagaag
agaaaggttggtctggaagaggctacgagagaagcaagacagaagatgcgcgaacctcct
gaggattggcagtggaaattcgggagtgaggcattgaccgagatatgggagatgggctat
cgtgacttgcacgatttacaaagacctttccatcctggcgatatccaagactttgccaaa
aagattcaactcgaagataggcgaatagaaatgcgaacaaaacaactcagacaacagcaa
gagagacgagaagcatttaagatggcagcggcggccaaagcagcagaggcggaggcagcg
gagatggagtccaaggctactaccacaaatttagagccacccacagacacaatctcggca
caaaatgtgtcatcaccacttcatccttcacttccggccaagcctgtttccagctctttg
cctcaagagcctccatcagttggtacacctgcatcaacggtggggccatctgcagcgccg
gtcacaagtacgccgacgcccaggccagcaactcccatgtctgcgccgttacctcctgac
gatcagataaagaaagcggaagagagcaaggaacgctggtcatggctggcgctccgaacg
gcccgtgagcagtatttatcacattttggaaaggttgggactggagatgttccggccctg
gtccaggagatcgagcgagagaaggagaaagaggcaaaagaaaccaaggcatctgaatcg
ccgagtgggagtagtccttcgaaatcgccaggaccagaaactctgaaagttgatgtagaa
ggggatataaagatggaagcaacgtag

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