Marasmius oreades (fairy-ring mushroom): 66072339
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Entry
66072339 CDS
T08156
Symbol
SMD1
Name
(RefSeq) mRNA splicing protein smd1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66072339 (SMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
66072339 (SMD1)
03032 DNA replication proteins [BR:
more03032
]
66072339 (SMD1)
Spliceosome [BR:
more03041
]
Complex A
U1 snRNP components
Sm proteins
66072339 (SMD1)
U2 snRNP components
66072339 (SMD1)
Complex B
U1 snRNP components
66072339 (SMD1)
U4/U6.U5 tri-snRNP components
66072339 (SMD1)
Complex C
U2 snRNP components
66072339 (SMD1)
DNA replication proteins [BR:
more03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
66072339 (SMD1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
WHD_ArnR1
Gemin7
Motif
Other DBs
NCBI-GeneID:
66072339
NCBI-ProteinID:
XP_043002190
UniProt:
A0A9P7RLF5
LinkDB
All DBs
Position
11:complement(<1390817..>1391348)
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AA seq
135 aa
AA seq
DB search
MKLVRFLMKLNNETVTIELKNGSVVHGTITGVDMQMNTHLKTVKMTTRNRDPVSLDALSI
RGNNIRYFVLPDALPLDTLLVDDAPKPKSRKKEDARGRGRGGRGGVGGGGGDRGGGGGGG
GRGGRGRGRGRGRGF
NT seq
408 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgtaagattcttgatgaaactgaacaatgagacggtgacgatcgagcttaag
aatgggtcggtggtgcatggaacgataactggcgtcgacatgcaaatgaatactcaccta
aaaactgtgaaaatgacgacacggaaccgggatcccgtttctcttgatgcattatccatt
cgcggcaacaatattcggtacttcgtgctacctgacgcccttcctcttgatactctactc
gttgacgatgcaccgaaacctaaaagcaggaagaaagaggatgcaaggggacggggacgt
ggaggaaggggtggtgtaggtggtggcggcggcgaccgtggtggtggtggtggtggtggt
ggccgtggtggacggggaagaggtagaggtcgtggcagaggtttctag
DBGET
integrated database retrieval system