Marasmius oreades (fairy-ring mushroom): 66073261
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Entry
66073261 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
66073261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
66073261
03019 Messenger RNA biogenesis [BR:
more03019
]
66073261
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
66073261
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
66073261
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_C
CID
zf_PCFS4
Zn-C2H2_12
Pfc11_Clp1_ID
CID_GANP
Motif
Other DBs
NCBI-GeneID:
66073261
NCBI-ProteinID:
XP_043013245
UniProt:
A0A9P7UY27
LinkDB
All DBs
Position
2:complement(1780651..1783339)
Genome browser
AA seq
623 aa
AA seq
DB search
MSLYPQPPQPYYNQQPYGASSSYAQQPAPNNFHNFHYPPPVPPPPVYYVDPATLRRDFSQ
RLSELTVNSRPIIQSLSMFAHDYVRFAEIIAQCLEAHIRRVPPWMKLPAFYLLDMVSKNI
YEPYARHFASFVIPLFIETYQQVDEPTRSKMIELVLTWRTGSPAGKELFGVPPQVSIERS
IWGDGSNNTRFNSTAQVTKAQVLSELEFTLGQKERALQANSADSIAQHHVAVLQQLRRLV
EAGVSQEELHQILGQLRSLMRTVTQPSPPPPPPVAVPPSWTPPAPFPSSAALVPPTQSIV
TTPKVEPTSSISHLSLPTAAPAAGFADLLSSLMKSGVVSVNGTPVGAGSTVTEQASSSSV
DVEREASRSYRTAIFNHEVQLSTVGLTRSRPAIQSLLYDKLALQCKQCGIRFFDTATGKK
ELEDHLDMHFRQNLKATQNIGRGHSRSWFIGADDWIHDVSDVKGKGRADFRPLNSKAAAV
AETSKREAELRSQFVVVPPGGEATTISCPVCKEILNSEFVEDDEEWVWKNAIRKDDRIYH
ATCHAEVSSTLVARLRTDVASRSRSGTPERVSHPKQQTPPRGISSSDAKLNGIKRKVDDE
NSLLSEPEGTPQLKKIALAPASS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtctctctatcctcagcctcctcagccctactacaatcagcagccgtacggtgcatcc
tcatcgtatgctcagcagccagccccaaacaactttcacaacttccactatccaccaccg
gttcctccacctcccgtttactatgttgatcctgccacacttcgcagggatttctctcaa
cgcctatcagagctgaccgttaactctcgccctatcattcagagtctctccatgtttgct
catgactacgtgcggtttgcagagataatagcccagtgtttggaggcccacatacgcagg
gtacctccttggatgaaactgcccgcattctatttactggatatggtcagcaagaatata
tatgaaccctatgctcgtcattttgcaagcttcgttatacctttgttcatcgagacttac
caacaagttgacgaaccgacacgcagcaagatgattgaactggttcttacttggcgaaca
gggtcacccgctggcaaagaactattcggggttcctcctcaagtctctatcgaacgaagt
atatggggagatggctcaaataatacgcgtttcaattccaccgcacaagtaaccaaggca
caagtcttgagcgaattagagtttacattaggacagaaggagcgtgctttacaggccaac
tctgctgactcgatcgcccagcatcatgtcgctgtgctacaacagctgagaagacttgtt
gaggctggcgtttctcaagaagaattacatcaaatactcggccagttacgatcgctcatg
cgaactgttacacaaccttccccccctccgcctccgcctgtagctgtacctccttcatgg
accccgccggcacctttcccgagttccgccgccctagtgccgcctactcaatcaatagta
acaacgccaaaggtggaacccacgtcaagtatttctcatctttccctaccaaccgcagct
cccgctgctgggttcgccgacctcctttcgtctctaatgaaatccggcgttgtatccgtt
aatggtactcccgtcggggcagggtctaccgtgaccgaacaagcatcgagctcatcggtc
gacgtcgagcgagaagcctcaaggtcatatcgaacagctatatttaaccatgaagtgcag
ctaagtacggttgggctgacacgctctcggccagccattcagtctttgctatacgataag
ctagcgctccagtgtaaacaatgtggtatacgattctttgatacggcgacaggcaaaaaa
gagctggaagaccacttggatatgcattttaggcaaaacctcaaagctactcaaaatatc
ggaagaggccatagccggagttggtttatcggggctgatgattggattcatgatgtttct
gatgtcaaaggcaaaggtcgggctgatttccgacctctcaattccaaagcagcagcagta
gccgagacgtcgaagcgagaagccgagttgcgatcacagtttgttgtcgtacctccagga
ggcgaagcgactaccatatcgtgtccggtttgcaaggagattcttaattccgagtttgta
gaggacgatgaagaatgggtctggaagaacgcaatcaggaaagacgatcggatatatcat
gcaacgtgtcatgcggaggtctccagtactttagttgcacgattgcgaacggatgtagca
agtcgcagtcgttctggtacacctgaaagagtatcccatcccaaacaacaaactcctccc
aggggcatctcatcgtctgatgcaaagctcaacgggattaagcgtaaggtcgacgacgag
aattcattgttaagtgaacctgaaggtacacctcaactgaaaaagatcgcactcgcgcca
gcatcgtcatga
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