KEGG   Marasmius oreades (fairy-ring mushroom): 66073778
Entry
66073778          CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03013  Nucleocytoplasmic transport
more03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66073778
  09122 Translation
   03013 Nucleocytoplasmic transport
    66073778
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    66073778
   03041 Spliceosome [BR:more03041]
    66073778
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     66073778
Spliceosome [BR:more03041]
 Complex C
  Other components
   EJC/TREX
    66073778
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    66073778
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st Beta-prop_Aladin Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_TEP1_2nd EIF3I WD40_Gbeta WDR55 Beta-prop_CAF1B_HIR1 eIF2A Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd CFAP251_N Beta-prop_EML Beta-prop_WDR35_TULP_N WD40_MABP1-WDR62_1st Beta-prop_EIPR1 B-prop_COPA_B_2nd Tricorn_2nd PD40 Beta-prop_HPS5 Cytochrom_D1 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 66073778
NCBI-ProteinID: XP_043013816
UniProt: A0A9P8AD30
LinkDB
Position
2:complement(2921734..2923299)
AA seq 382 aa
MWLCSSLCSYIERSTSSSFLECQPVKMTSTANSKDENDEIQPPQKPPSPPPHTTFAIRGI
HPPTFSAFKPRDYRIPNSQGMNHVAWNCDGKKLAAVGVDKATRVWNPDKSMEHRSAQMFS
GGHADEVDYVSWNPTHPELFCTSSQKDRRIVFWDARQSRYIQQIASKSAPNYTTYSPDGR
TIMICSTANHTSFLSFGKEVEDSKEQWRPTDKVPTTASTGIFNHAGNGLILAHHAEHSVK
VLDYPSMEARESAPAHVAGCVTLALDPRGRYLATGGHDSIVNLFDVNDWISAKTITSSDH
SITAVSFSFDGEYLAIASAGSYIDICGTETCAPLHRVPAVGPAPSVSWHPSKYIIAYCGQ
TKLREGGPPPVSVVSLFGLLDS
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgtggctgtgctcttccctttgttcctacatcgagaggtcgacttcctcatcctttcta
gagtgccaaccagtcaaaatgaccagtactgcaaatagcaaagacgaaaatgacgagatc
caacctcctcaaaagcccccttctccaccgcctcacactacattcgcaattcgaggtata
catcctccaaccttctctgctttcaagccgagggactaccgaataccaaattctcagggc
atgaatcacgttgcgtggaattgcgacggaaagaagctggctgctgtgggtgtggacaag
gctaccagagtttggaatccggataagagtatggaacaccggtccgcccagatgttttcg
ggaggacatgccgacgaggttgattatgtctcgtggaatccaacccatccagaattattt
tgtacatccagtcaaaaagacaggaggatcgtgttttgggatgcaaggcagagtagatat
attcaacaaattgcttcaaagtcagcccccaactacacgacatattccccggatggtcgg
acaatcatgatatgttcaacggcgaatcatacatctttcttgtcattcgggaaagaggtg
gaagatagcaaggaacagtggagacccacggataaagtcccgaccactgcgagcaccgga
atattcaatcatgcagggaacggtttaattctggctcatcacgcggaacatagtgtcaaa
gtactcgactatcccagcatggaagcacgagaaagtgctcctgcgcatgtcgcaggatgt
gtaacgttggctctagatcctcgaggtcgctacctggctacagggggacacgattccatc
gtgaatctctttgacgtaaatgattggatttctgcgaaaaccataacgtcctccgatcat
tccatcaccgccgttagcttttccttcgatggcgaatacctagcaatcgcgagtgcggga
tcatatattgacatttgtgggacagaaacatgcgcacccttacacagagttccagctgta
ggccctgccccatcagtgagctggcacccctcaaaatacattattgcttattgtgggcag
acgaaactaagagaaggtgggccgccgccggtttccgtggttagcctgtttggacttttg
gactcttag

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