KEGG   Marasmius oreades (fairy-ring mushroom): 66075242
Entry
66075242          CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K12881  THO complex subunit 4
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03013  Nucleocytoplasmic transport
more03015  mRNA surveillance pathway
more03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    66075242
  09122 Translation
   03013 Nucleocytoplasmic transport
    66075242
   03015 mRNA surveillance pathway
    66075242
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    66075242
   03041 Spliceosome [BR:more03041]
    66075242
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     66075242
    TREX complex
     66075242
Spliceosome [BR:more03041]
 Complex C
  Other components
   EJC/TREX
    66075242
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    66075242
SSDB
Motif
Pfam: RRM_1 FoP_duplication RRM_occluded GlcNAc-1_reg RRM_PARP14_3 RRM_10
Other DBs
NCBI-GeneID: 66075242
NCBI-ProteinID: XP_043011887
UniProt: A0A9P7UV02
LinkDB
Position
3:complement(<2621914..>2623478)
AA seq 228 aa
MSSNSMDKSLDEIIKSRPRVRRTSSRTARNQVLGKTPARSAASPGSRAAARAPKVANQGS
AATTQPAQSADKIMVSNLPPDVNEQQVKELFHTTVGPLKEVTLHYDSAGRSKGVASVHFQ
RKGDGTKAYQQYNNRLIDGKRPMKIEIVVDPARPASLVARVAPATAAAITQTNGTRATAR
AGRGRRAARGGGKRKSPRPQKTAADLDAEMEDYTAGTGNAAAPAATAS
NT seq 687 nt   +upstreamnt  +downstreamnt
atgtcttccaacagcatggacaaatctcttgacgaaatcatcaagagcagaccaagggtt
cgacgaacaagcagtcgcactgcccgcaatcaggttctagggaaaacaccagctcgttct
gccgctagtccaggcagtcgcgctgcagctcgtgctccaaaggtcgcaaatcaaggctct
gcggctaccacccaaccagcccaatcagcggacaaaattatggtctcgaatcttccgccg
gatgtgaacgaacaacaagttaaagagttattccacaccaccgttggcccgttgaaagag
gtcacgttgcactatgatagcgccggccgctccaaaggtgttgcctcggtgcatttccag
cgtaaaggcgacggcaccaaagcctatcaacaatacaacaatcgactcattgatggaaaa
cgacccatgaagatcgaaatcgtcgttgaccccgctcgtcctgcttcattagttgcccgt
gttgctcctgctaccgctgcagcgattacgcagaccaatggcacgcgtgccactgccagg
gctggaagaggaagaagagcagcaaggggtggtggcaagcgcaagagcccgaggccccaa
aagacagctgctgatctagatgccgagatggaggactacactgccggaacaggcaatgcc
gcagcacctgcagccacagcctcttag

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