Marasmius oreades (fairy-ring mushroom): 66075242
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Entry
66075242 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12881
THO complex subunit 4
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03013
Nucleocytoplasmic transport
more03015
mRNA surveillance pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
66075242
09122 Translation
03013 Nucleocytoplasmic transport
66075242
03015 mRNA surveillance pathway
66075242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
66075242
03041 Spliceosome [BR:
more03041
]
66075242
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
66075242
TREX complex
66075242
Spliceosome [BR:
more03041
]
Complex C
Other components
EJC/TREX
66075242
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
66075242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
RRM_occluded
GlcNAc-1_reg
RRM_PARP14_3
RRM_10
Motif
Other DBs
NCBI-GeneID:
66075242
NCBI-ProteinID:
XP_043011887
UniProt:
A0A9P7UV02
LinkDB
All DBs
Position
3:complement(<2621914..>2623478)
Genome browser
AA seq
228 aa
AA seq
DB search
MSSNSMDKSLDEIIKSRPRVRRTSSRTARNQVLGKTPARSAASPGSRAAARAPKVANQGS
AATTQPAQSADKIMVSNLPPDVNEQQVKELFHTTVGPLKEVTLHYDSAGRSKGVASVHFQ
RKGDGTKAYQQYNNRLIDGKRPMKIEIVVDPARPASLVARVAPATAAAITQTNGTRATAR
AGRGRRAARGGGKRKSPRPQKTAADLDAEMEDYTAGTGNAAAPAATAS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccaacagcatggacaaatctcttgacgaaatcatcaagagcagaccaagggtt
cgacgaacaagcagtcgcactgcccgcaatcaggttctagggaaaacaccagctcgttct
gccgctagtccaggcagtcgcgctgcagctcgtgctccaaaggtcgcaaatcaaggctct
gcggctaccacccaaccagcccaatcagcggacaaaattatggtctcgaatcttccgccg
gatgtgaacgaacaacaagttaaagagttattccacaccaccgttggcccgttgaaagag
gtcacgttgcactatgatagcgccggccgctccaaaggtgttgcctcggtgcatttccag
cgtaaaggcgacggcaccaaagcctatcaacaatacaacaatcgactcattgatggaaaa
cgacccatgaagatcgaaatcgtcgttgaccccgctcgtcctgcttcattagttgcccgt
gttgctcctgctaccgctgcagcgattacgcagaccaatggcacgcgtgccactgccagg
gctggaagaggaagaagagcagcaaggggtggtggcaagcgcaagagcccgaggccccaa
aagacagctgctgatctagatgccgagatggaggactacactgccggaacaggcaatgcc
gcagcacctgcagccacagcctcttag
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