Marasmius oreades (fairy-ring mushroom): 66076303
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Entry
66076303 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
66076303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
66076303
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
66076303
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
Motif
Other DBs
NCBI-GeneID:
66076303
NCBI-ProteinID:
XP_043010027
UniProt:
A0A9P7UT81
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Position
4:complement(<1316489..>1317794)
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AA seq
325 aa
AA seq
DB search
MSLPSTTVTTATPLSSDTQSESLKAAIFQRLHPRVYLERFLAEGIRPDGRTEAEWRTVDI
NIGSISTANGSALIRMGGTTIVCGVKAEIAEPELDRPNEGFLVPNLDLPAICSSKFKPGP
PSEEAQILSERLNDVLVASNILSLSSLCIHPGQSVWVLYVDATCINYDGNAFDAAVLAMV
CALRDTILPQATYDEVTGRTTCSPIHSNSKPGLKLKLNEGSIPIGLSFGVFGGTRILADP
TSFEEPLLDTSVSIVIDARGQLFSVNQTGVGVLKTGEQDMEVDTTVNKEDALLQCISLAK
ERHHKLKELLNTASRVTHYGSSDRT
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgccttctaccaccgtgaccacggccactccgctgtcatcagacactcagagt
gaatcactaaaagccgcgattttccaacgtctacaccctcgtgtataccttgaacgattt
ctagcagaaggaataagaccagatggtcggaccgaggcggaatggagaacggtagacatt
aatatcggatcgatatcgaccgccaacggatctgcactgattcggatgggaggaacaaca
atcgtctgtggcgtgaaagctgagattgcagaaccggaacttgatcgtccaaacgagggt
ttcttagtacccaatctcgaccttcccgcaatctgttcatccaaattcaagcctggaccc
ccatcggaagaggcacaaattctgtcagaaaggctcaatgatgtcctggttgcatcaaat
atcctttcactctcttctctctgtatccatccaggacagtctgtctgggttctttacgtt
gacgcgacgtgcataaattacgatggaaacgcgttcgatgcagccgttttggcgatggtg
tgtgcgttgcgggataccattcttccccaagcgacgtatgatgaggtcaccggccgcacg
acatgttcacccatccattcaaactcgaaaccggggttgaaactaaaattgaacgagggt
agcatacccatcggattgagcttcggcgtcttcggcggaacacgtattcttgccgaccct
acatcttttgaggagcccctgctggacacctcggtttcaattgtaatcgatgctcgggga
caacttttctccgtaaaccaaactggtgtcggggtactcaaaactggcgagcaggacatg
gaagttgacactactgtgaacaaggaggatgctctactccagtgtatctcactcgcaaag
gagagacaccacaaattgaaggaacttttgaatactgccagtcgtgtaacacattatggc
tcctccgaccgtacgtaa
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