Marasmius oreades (fairy-ring mushroom): 66076329
Help
Entry
66076329 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K15542
polyadenylation factor subunit 2
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
66076329
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
66076329
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
66076329
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_WDR90_POC16_2nd
DSE1_N
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_Aladin
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
CFAP251_N
ASA1
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
Beta-prop_NOL10_N
PROPPIN
eIF2A
Beta-prop_Vps41
Beta-prop_WDR41
Beta-prop_HPS5
NBCH_WD40
Tricorn_2nd
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_DCAF4
Ge1_WD40
WD40_RFWD3
PAC11
Beta-prop_SPT8
WDR54
RMC1_N
Beta-prop_RIG_1st
TRM82_WD
Beta-prop_ELP1_1st
B-prop_COPA_B_2nd
MIOS_WD40
Beta-prop_ACSF4
WD_LRWD1
Motif
Other DBs
NCBI-GeneID:
66076329
NCBI-ProteinID:
XP_043010057
UniProt:
A0A9P7UT91
LinkDB
All DBs
Position
4:complement(<1390513..>1392514)
Genome browser
AA seq
614 aa
AA seq
DB search
MSTTFPLLLPPNSITSTRSPREWTPKAYRQPPQPPPTDDSKTQELELAYARQFMDGKVIK
KTRPRRTVDYNGGLGRWFLLRKLSPNPHFVPYMRPCPPAIIDLLPPKAYPENPSTSLCTK
FVHTSTNKIRCPVNIVTWTPEARRILTGSTSGEFTLWNGLTFNFETILQAHDTAICTFSF
THSGAYLASADKTGIIKYFEPNMNNLTAWQGSSSREAIRGISFSPDDRRFATASDDRTVR
IWAFEESRVESVLDGHGWDVKCVQWHPTKGLIVSGSKDNQIKFWDPRSGTILTTLHQHKN
TIQALAWSPNGNFVASASRDQTVRVFDIRAMKEFRILKGHKKEVCSVTWHPFHQILVSGG
SEGAIIHWDLSTDDSAPPLTLPEGPQIPPTSSTQTAASNQSLSFLVTPTPVTTPRCTLTQ
AHDSNVWSMQFHPLGHLLVSASNDHTTRFWSRERPGEGVGEEGVKPGDAEWAGEGEGPDE
EMMVPGFGGAPSGWKEEDSVDYGNQYSNSHDGGYGRQVGAESESFRGPQTGGDDDFSIPG
FGADSAADSAGGGSMYELGPGPGRGYDSGRGGYNSRQHEDSGHSGEWGGRSNGHGHGGGG
RSGRWGGGRRSNRY
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccacgtttccattgctcctccccccaaactcgatcacttcgacgcgctctcct
cgcgaatggacacccaaagcatacagacaacctcctcaaccgcctccaacggacgattct
aaaactcaagaattagagctagcttatgcccgacagtttatggatggaaaagttatcaag
aaaacacgtccccgtcggactgtagattacaatggtggattaggtcgttggtttctgtta
aggaaactcagtccgaatccgcacttcgtcccgtatatgaggccttgtcctccagcaatt
atcgaccttcttccacccaaagcatacccagaaaacccatctacttcattatgtacaaaa
ttcgtgcacacttccaccaacaaaattcgttgcccagtaaacatcgtcacttggaccccc
gaggccagacgtatcctaaccggttccacctccggggaattcaccctttggaacggctta
acattcaactttgaaacaattctccaagctcatgataccgctatctgcaccttctctttc
acccactccggtgcctatctagcatccgcggacaaaacagggatcataaagtacttcgaa
cccaatatgaacaatttgaccgcctggcagggatccagttctcgagaagccataagaggt
atcagttttagtccggatgacagaaggtttgctactgcgagtgatgacaggacggttaga
atatgggcgttcgaggaaagcagggtcgagagtgtgttggatggccatggatgggacgtc
aagtgtgttcagtggcatccaacgaaaggtctcattgtgtcgggaagtaaagataaccaa
atcaagttctgggatccgcgttctggtacaatacttacaacactccaccagcacaaaaac
acgattcaagcactggcgtggtcgccaaacggcaattttgtagccagtgcatcccgagat
cagacggttcgcgtatttgatatacgtgccatgaaagaatttagaatactcaaaggccat
aagaaagaagtttgttctgtcacctggcacccctttcaccaaatactcgtttccggcggc
tcagaaggggccatcatacattgggacctctcaaccgatgattcagctccaccccttaca
ctccccgaaggcccacaaatcccacccacgtcttctacgcaaacggcagccagcaaccag
tcccttagcttccttgtaacaccgacgcccgtgactacccctcgatgtaccttaacccag
gcgcatgattcaaacgtttggtctatgcaattccatccgttaggccacctccttgtctca
gcctcaaatgaccacaccactcgcttttggtcgcgtgaacggcccggagaaggtgtagga
gaagaaggtgtgaaacctggcgatgcagagtgggctggagagggagaaggaccggacgag
gagatgatggttcctggatttggaggggcgccatcggggtggaaagaagaggatagcgtt
gattatggaaaccagtattcaaactctcacgatgggggctacggacgccaagttggggct
gaatcggaatcgtttagaggacctcaaactggaggtgatgatgacttttctatcccggga
tttggtgctgattccgctgctgattccgctggtggcgggagcatgtatgaactcggtccc
ggccctggtagggggtatgattctggtagaggaggatacaattcacgacagcacgaggat
tctggtcactctggcgaatggggtggccgcagcaatggtcatggtcatggtggtggtggt
cggtcaggtcgttggggaggtggtaggagaagtaatcgctactga
DBGET
integrated database retrieval system