Marasmius oreades (fairy-ring mushroom): 66076372
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Entry
66076372 CDS
T08156
Symbol
RFC3
Name
(RefSeq) Subunit of heteropentameric Replication factor C (RF-C)
KO
K10756
replication factor C subunit 3/5
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03030
DNA replication
more03410
Base excision repair
more03420
Nucleotide excision repair
more03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
66076372 (RFC3)
03410 Base excision repair
66076372 (RFC3)
03420 Nucleotide excision repair
66076372 (RFC3)
03430 Mismatch repair
66076372 (RFC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
more03032
]
66076372 (RFC3)
03036 Chromosome and associated proteins [BR:
more03036
]
66076372 (RFC3)
03400 DNA repair and recombination proteins [BR:
more03400
]
66076372 (RFC3)
DNA replication proteins [BR:
more03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
66076372 (RFC3)
DNA Replication Termination Factors
ELG1-RFC complex
66076372 (RFC3)
Chromosome and associated proteins [BR:
more03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
66076372 (RFC3)
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
66076372 (RFC3)
Check point factors
HRAD17(Rad24)-RFC complex
66076372 (RFC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_11
AAA_30
AAA_assoc_2
DUF815
AAA_5
nSTAND_NTPase5
AAA_22
RuvB_N
DEAD
AAA_24
ResIII
AAA_16
AAA_lid_RFC1
AAA_19
ATPase_2
AAA_28
AAA_3
AAA_33
AAA_7
Viral_helicase1
Methyltransf_31
nSTAND3
Mg_chelatase
bpMoxR
GPAT_N
Fe-S_biosyn
Motif
Other DBs
NCBI-GeneID:
66076372
NCBI-ProteinID:
XP_043010102
UniProt:
A0A9P7UTA5
LinkDB
All DBs
Position
4:complement(1483004..1484742)
Genome browser
AA seq
357 aa
AA seq
DB search
MDSDYDTPMDIESIPASAKGKGKALDIDVPPPLDKEHLPWVEKYRPATLEDVVSHKDIIS
TIEKFIEKNRLPHLLFYGPPGTGKTSTILAVARRIYGPDYRKQILELNASDDRGIDVVRE
QIKQFAETRTLFSKGFKLIVLDEADMMTQAAQAALRRVIEQYTKNVRFCIICNYVNKITP
AIQSRCTRFRFSPLPITEVKRRLDTVIEAEKVNLSEDGKQALLKLSKGDMRRALNVLQAC
HAAYDLTTETEIYNCTGNPHPSDIEKIVQYMLNHDFTTAYQLISTMKIERGLALQDLLTG
AYEYIETIELKPHARVYLLDHLATTEHRLSTGGNEKIQLSALLGAFKNAVELTSRSA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgattacgacacaccgatggacattgaatcaatcccggcatctgctaaaggc
aagggaaaggctcttgatattgacgttccacctcctttggataaagagcatctaccatgg
gttgagaaataccgcccggctaccttggaagatgtggtttcgcacaaagatatcataagc
acaatcgaaaaattcattgagaagaacaggttgcctcatctcttgttctatggccctcct
ggaaccggaaagacgtcgacaatacttgctgttgctcggagaatatatggaccagattat
aggaaacaaatccttgagctgaatgcttcagacgaccgaggtattgacgtcgtgcgagag
caaataaaacagttcgcagaaactcggactctcttctcgaagggattcaaactcatcgtt
ctcgacgaagcagacatgatgacccaagccgctcaagcagctctccgacgggtcatcgaa
cagtacaccaagaacgtcagattctgtattatatgcaactatgtcaacaagattacacct
gccattcaaagtcgatgcacacgcttcaggttctctccactcccaattactgaagtgaaa
agacgattagatacagtcatagaggctgagaaggtaaacttgtctgaagacggcaagcag
gcactgctcaaactgtcgaagggcgacatgcgacgtgctttgaacgttctccaggcatgc
catgccgcttatgatctcacgaccgaaacggaaatctacaattgtaccgggaatcctcat
ccatcagacatcgagaagatcgttcagtacatgctcaatcatgatttcaccactgcgtac
caacttatctccaccatgaaaatagaacggggtctagcattacaagaccttctgactggg
gcgtatgagtacatagaaactatagagttgaaacctcacgcccgggtatatcttttagac
catctcgcgacaacagagcaccgattatcgactggtggtaatgaaaagattcaacttagc
gctttattgggtgccttcaagaatgcagtcgaactcacgtcccggtcggcgtaa
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integrated database retrieval system
