KEGG   Marasmius oreades (fairy-ring mushroom): 66076579
Entry
66076579          CDS       T08156                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03030  DNA replication
more03410  Base excision repair
more03420  Nucleotide excision repair
more03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    66076579 (RFC4)
   03410 Base excision repair
    66076579 (RFC4)
   03420 Nucleotide excision repair
    66076579 (RFC4)
   03430 Mismatch repair
    66076579 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:more03032]
    66076579 (RFC4)
   03036 Chromosome and associated proteins [BR:more03036]
    66076579 (RFC4)
   03400 DNA repair and recombination proteins [BR:more03400]
    66076579 (RFC4)
DNA replication proteins [BR:more03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    66076579 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    66076579 (RFC4)
Chromosome and associated proteins [BR:more03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    66076579 (RFC4)
DNA repair and recombination proteins [BR:more03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     66076579 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    66076579 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_22 AAA_14 AAA_16 nSTAND3 RuvB_N RCF1-5-like_lid AAA_3 Viral_helicase1 Mg_chelatase Rad17 nSTAND_NTPase5 MeaB Gp44_lid NTPase_1 AAA_assoc_2 RNA_helicase AAA_19 AAA_11 ABC_tran AAA_18 KTI12 SRP54 ATPase_2 NB-ARC nSTAND6
Other DBs
NCBI-GeneID: 66076579
NCBI-ProteinID: XP_043010335
UniProt: A0A9P7S2G3
LinkDB
Position
4:complement(<2225221..>2226592)
AA seq 334 aa
MSSSRPNETSYELPWVEKYRPHVLDDVVGNSETIDRLKVIARDGNCPHIIISGMPGIGKT
TSIHCLAHQLLGDAYKEGVLELNASDERGIDVVRNKIKSFAQKKVTLPPGRHKIVILDEA
DSMTAGAQQALRRTMEIFSNTTRFCLACNMSNKIIEPIQSRCAILRYAKLRDAEILKRLL
EICELEKVSYNDDGLTALIFTSEGDMRQAINNLQSTHSGFGFVSGDNVFKVCDQPHPIIV
QELVRYCMKGDVDKGMNKLNELWEQGYSAVDIVVTIFRVVKAFDELPEYTKLEFIKEVGF
THMRILEGVSTLLQLAGLVARLCKMSLKPELFKV
NT seq 1005 nt   +upstreamnt  +downstreamnt
atgtcctcctcacgtccgaacgaaacatcttatgagcttccctgggtcgaaaagtatcga
ccccacgttctcgacgatgtagttggtaattcagaaaccattgaccgtctaaaagtcatt
gcaagagacggaaactgtccccacatcataatttcgggcatgcccggtataggcaaaact
actagtatacactgtcttgcacatcaactgttgggagatgcgtataaagaaggggtttta
gagttgaacgcttcagatgaacgaggaattgacgttgttcgcaacaaaataaaatcattt
gcgcagaagaaagtcactttacctcctggtcgacataagattgtcatcctcgatgaagca
gacagtatgacagcaggtgctcagcaagcattgcgacgtaccatggagattttttccaac
actacccgcttttgcttagcatgtaacatgagcaacaaaattatcgagcctatacaaagt
cgctgtgccattctaagatacgcaaaactgagggatgcagagatcttaaagcggttgttg
gagatctgcgagctggagaaagtttcttacaatgacgacggattaacagcgctcatcttt
acatcggaaggtgatatgcgtcaagccattaacaatctacagtccacgcactctggtttc
ggtttcgtatctggcgacaacgtcttcaaagtatgcgatcagccacatccaatcatcgta
caagagctcgtcaggtattgtatgaaaggcgatgtcgataagggcatgaataagctcaac
gagctttgggaacagggatatagtgccgtggatatagtggtgacgatattcagagtagtc
aaggcttttgatgagcttccggagtatacaaagctggagttcataaaggaggttgggttc
acccacatgcgcattttggaaggcgttagcacgctgcttcaacttgctggtcttgttgct
cgtttgtgtaaaatgagcctcaaacccgagcttttcaaagtttga

DBGET integrated database retrieval system