Marasmius oreades (fairy-ring mushroom): 66080176
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Entry
66080176 CDS
T08156
Symbol
DBP5
Name
(RefSeq) RNA helicase required for poly(A+) mRNA export
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03013
Nucleocytoplasmic transport
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
66080176 (DBP5)
03015 mRNA surveillance pathway
66080176 (DBP5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
66080176 (DBP5)
Enzymes [BR:
more01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
66080176 (DBP5)
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
66080176 (DBP5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CMS1
AAA_22
Motif
Other DBs
NCBI-GeneID:
66080176
NCBI-ProteinID:
XP_043005883
UniProt:
A0A9P7RUR5
LinkDB
All DBs
Position
7:complement(<1204970..>1206861)
Genome browser
AA seq
462 aa
AA seq
DB search
MATVQKDDEGFYTPTAEGSTSTPAKDEQPDASKTDLINSTFEVSVTLADQQGDPNSPLYS
VKSFEELGLLEELLKGIYAMGFSKPSKIQERALPLLLSNPPTNMIGQSQSGTGKTAAFVL
TMLSRIDYTKNKPQALCLAPSRELARQIMSVVIAMGKFTQVQTEYAIKENLPRSVTHITA
HVLVGTPGTMYDLLRRKVIDTSELKVFVLDEADNMLDQDGLGDQTLRVKNLLPRGLNAPQ
IILFSATFPAHVRAFANKFAPDANKIELQNNELSVDSIRQFYMDCKNEDHKYDILVTLYT
LLTIGQSIIFCQHRHTADRISQRMTAEGHKVSSLHGAKDATERDRIIDNFRLGKEKVLIT
TNVIARGIDIMQVNMVVNYDLPLMNERGGNKSEDTRPDIETYIHRIGRTGRFGRKGISIN
FVHDRKTWLQMEEIEKATGKSIMRIETNDLDMMEEKMKKALK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccactgtgcaaaaagacgatgaaggattctatacgccaactgcagaaggttctaca
tctacaccagctaaagacgagcaacccgacgcatccaagaccgacttgattaactctaca
ttcgaagtcagcgttacccttgccgatcaacaaggcgatcccaattctccgttatacagt
gtgaagtccttcgaagaactaggactgcttgaagagcttctcaaaggaatttatgccatg
ggtttttctaaaccatccaagatccaagaacgcgctcttcctctcctcctttccaaccct
cctacaaacatgatcggtcaatcgcaatctggtacaggcaaaacagccgccttcgttctc
accatgctcagtcgaatcgactacaccaaaaacaagccacaggctttatgtcttgcccca
tctcgtgaactagcccgtcaaataatgtccgtggtcatagctatgggtaaattcactcaa
gtacagactgagtacgcaatcaaggagaatcttccccggagcgttactcatatcactgct
catgtcctcgttggaactcctggaacgatgtacgatctgctacggagaaaggttatagac
acgagcgagttgaaggtgttcgttctcgacgaagcagataacatgttagatcaagatggt
ttgggtgatcagacactgagggtcaaaaacctgcttccccgaggactcaatgccccacaa
atcatcctcttctccgccacattcccggcccacgtccgtgcattcgcaaacaagtttgca
cctgatgcaaacaaaatcgagctacaaaataacgagctcagtgtcgattccattcgacaa
ttttacatggactgcaagaacgaagatcataaatacgacattctagtaaccctctataca
ctcttgaccatcggtcagagcattatattctgtcagcacagacatacagcggacagaata
tctcagaggatgacagcagagggacataaagtgtcttcccttcatggcgccaaggacgca
acagaacgtgatagaatcattgataatttccgtttaggaaaggagaaggtgttgattacc
acgaacgtcattgcacgaggtatcgatatcatgcaagtcaacatggtcgtcaactacgat
ttacccctcatgaacgaacgcggtggaaacaagtcagaggatactcgacctgatatcgaa
acctacatccatcgtattggtcggacaggtcgtttcggtcgcaagggtatctcgatcaac
ttcgttcatgacaggaagacttggcttcagatggaggaaattgagaaggctaccggcaag
tcgatcatgcgaattgagactaatgatttagacatgatggaagagaaaatgaaaaaggct
ttgaaatag
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