Marasmius oreades (fairy-ring mushroom): E1B28_000817
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Entry
E1B28_000817 CDS
T08156
Symbol
RPB2
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03020
RNA polymerase
more03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E1B28_000817 (RPB2)
09124 Replication and repair
03420 Nucleotide excision repair
E1B28_000817 (RPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_000817 (RPB2)
03400 DNA repair and recombination proteins [BR:
more03400
]
E1B28_000817 (RPB2)
Enzymes [BR:
more01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
E1B28_000817 (RPB2)
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
E1B28_000817 (RPB2)
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
E1B28_000817 (RPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
66069893
NCBI-ProteinID:
XP_043015390
UniProt:
A0A9P7V251
LinkDB
All DBs
Position
1:complement(2608075..2612401)
Genome browser
AA seq
1224 aa
AA seq
DB search
MSVENDLTQDPYAYDEPNFGYEDEEGEDHGEITQEDCWTVISSFFDQKGLVRQQLDSFDE
FVQNTMQELVDENSDLILDQAEQYTGASNEATGSRRYEIKFGQIYLSRPTVTEADGLVVP
VFPQEARLRNLTYSAPLYIEMKKRVLTGRDDGGETVWETENDSGAEGTKVWIGKVPIMLR
STFCILRGLQDHDLYDLNECPYDSGGYFIINGSEKVLIAQERMATNHVYVFAKAQPSPIN
FLAEIRSAVEKGGKTISQFQVKMFHRNQERSLGNVMKATIPYIKVDIPIWVVFRALGVIS
DRDILEHICYDMQDVQMLEMLKPCIDDGFVIQDREVALDFIGNRGTTTGLSRERRIRYAQ
EILQKEMLPHVSMAEGSESKKAYFFGYMIHRLLLAALERRELDDRDHFGKKRLDLAGPLL
ANLFRMLFRKLTKDVYRYMQKCVETHKEFNLALAVKHQTITNGLKYSLATGNWGDQKKSM
SSKAGVSQVLNRYTYASTLSHLRRCNTPLGREGKIAKPRQLHNTHWGMVCPAETPEGQAC
GLVKNLALMSCISVGSYSAPVIEFLEEWGLESLEENAHSSTPCTKVFVNGVWMGVHRDPA
NLVKTIKKLRRKDDISPEVSVVRDIRERELRLYTDAGRVCRPLFIVENQQLLLQKKHVRW
LTNGQNDEGSEYKWEHLVKGGIVELLDAEEEETVMISMTPEDLENSRLQQQGIDPHANDG
DFDPAARLKAGINAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIF
LTNFLIRMDTMANILYYPQKPLATTRSMEYLKFRELPAGQNAIVAILCYSGYNQEDSVIM
NQSSIDRGLFRSIYYRSYMDLEKKSGVQQLEEFERPSRENTLRMKHGTYDKLEDDGLIAP
GTGVRGEDIIIGKTAPIPPDSEELGQRTRTHTRRDVSTPLKSTESGIVDQVLITTNSEGQ
KFVKVRVRATRIPQIGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDLIINPHAIPSRM
TIGHLVECLLSKVATLIGNEGDATPFTDLTVESVSMFLRQKGYQSRGLEVMYHGHTGRKL
QAQVYLGPTYYQRLKHMVDDKIHSRARGPVQILTRQPVEGRSRDGGLRFGEMERDCMISH
GIAGFLKERLFEASDAYRLHVCDICGLTAIANLKKQNFECRACKNKTAVSQLYIPYAAKL
LFQELQSMNIAARLYTVSSGRIRD
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagaaaatgaccttactcaagacccatacgcttacgatgaacccaatttcggt
tatgaggatgaggaaggcgaagatcacggggaaataacgcaggaggactgttggactgtc
atctcaagtttctttgaccagaagggtcttgtccgtcaacaactcgactctttcgacgag
tttgttcaaaatactatgcaagaactggtggatgagaactccgatctcattctggaccaa
gcagaacagtacacaggtgcatcgaacgaagccaccggcagtcgcagatacgaaatcaaa
tttggacaaatctatctctcaagacctactgttactgaagcagatgggcttgtcgtaccg
gtcttcccgcaggaggcaaggttacgcaacctgacctattcggcgcccctgtacatagaa
atgaagaagagggtgctgactggccgagatgacggaggggagacggtgtgggagacagaa
aatgatagtggagcagaagggacgaaagtatggataggcaaggtaccgatcatgctgcgt
tccactttctgcatcctccgaggtcttcaggaccatgacctttatgacctgaacgagtgt
ccatacgattctggaggatacttcatcatcaacggttccgaaaaagtcctcattgcacag
gagcgtatggctacaaatcatgtatacgtatttgccaaagcacaaccctctcccatcaac
tttctagcagaaattcgtagcgcggttgagaagggtggaaaaactatcagtcagtttcag
gtcaaaatgttccaccggaaccaagagcgttcccttggaaatgtcatgaaagccacaata
ccttatatcaaagtcgatattcccatctgggtcgtgtttcgtgccctcggggtcatctct
gacagggatattctcgagcacatatgctatgatatgcaggatgtccaaatgctggagatg
ttgaaaccttgcatagatgacggattcgtcattcaagatcgtgaagtcgcgttggatttc
atcggtaatcgtggtaccacgaccggtctttcacgagaaagacgtatccgttacgcacag
gagatcctgcaaaaggagatgttgccgcacgtatcgatggcagagggttctgaatccaag
aaggcctatttcttcggatacatgatccatcgattacttctcgcagccttggaaagacgt
gaacttgatgaccgtgaccattttggtaagaagcgtttggaccttgcaggacctctattg
gccaacctgttccggatgctgttccgaaagttgaccaaggacgtgtatcgttacatgcaa
aagtgtgtggaaacgcacaaggagttcaacctggcgctcgccgtcaaacaccagactatc
acgaacggactcaagtattctcttgccactggcaattggggtgaccagaagaaatccatg
tcttcaaaggcaggagtgtcacaagtgctcaatcgttacacttatgcgtctacattgtcc
catttgcgtcggtgtaatactcctcttggtcgtgaaggaaagatcgccaagccacgtcag
ctacacaatactcattggggaatggtctgccctgcagagacacccgaagggcaggcctgt
gggctggtcaagaatctcgctcttatgtcctgcatctccgttgggtcttactctgcaccc
gtcatcgagtttttggaggagtgggggttggaatcgctggaagagaacgcacactcgagc
acgccgtgtacgaaggtgttcgtgaatggtgtatggatgggtgtgcatcgtgatccagcg
aacctggtcaaaacgatcaagaaacttcggagaaaggatgatatcagccctgaagtttct
gtagttcgagacatccgagaaagagaactgcggctgtatactgatgcgggtcgggtttgc
cgacctttgttcatcgtggaaaaccagcaactcttactccagaagaaacacgtcaggtgg
ctcaccaacggtcaaaacgatgaaggatccgagtataagtgggagcaccttgtgaaagga
ggtattgtggagttgctggatgctgaggaagaagagactgtcatgatttcgatgacaccc
gaggacctcgagaactcgcggcttcaacagcagggcatcgatcctcacgcaaacgacggt
gacttcgatcctgctgctcgtttgaaggcaggcataaacgctcatacttggacccactgc
gagattcatcctagcatgattcttggaatctgtgcgagtataattcctttcccagatcat
aatcagtctcctcgtaacacctaccagtccgcgatggggaaacaagctatgggaattttc
cttacgaacttcctcatccgcatggatacgatggcaaatatcctttattatcctcagaag
cctcttgctacgactcgttccatggagtatttgaaattccgagaactacccgcagggcaa
aacgccatcgtcgccattctttgttatagtggatataaccaggaagattcggtcatcatg
aaccaaagttctatcgaccgtggacttttccgaagcatctattatcgaagttacatggat
cttgagaaaaagagcggtgttcagcagctggaagagttcgaaagaccttcacgagagaac
acgctacgaatgaagcacggaacatatgataaactcgaagatgatgggctgatcgctcct
gggactggcgttcgtggagaagatattattattggaaagacagctccgattcctcccgac
agcgaagagttgggccagcgtactcgtacgcacacgcggagagacgtttcgacaccactc
aagagcacagagagtggtatcgttgaccaagtgctcatcactacaaattccgaaggacag
aagttcgttaaagtccgtgttagggctacgcgtattcctcagatcggcgataagtttgct
tctcgacacggacagaagggtacaatcggtatcacttacagacaggaagacatgcctttc
acagcagaaggtatcacccctgatctaattatcaatcctcacgccattccatctcgtatg
actattggtcacttggtggagtgcctgttgtcgaaggtagccaccttgatcggtaacgaa
ggtgacgcgacgcccttcactgatctaactgtagagtcggtctctatgttcctgcgacag
aaggggtaccaatctcgtggtttagaggtcatgtatcacggacacactggtcgaaagctg
caagcacaagtctatctcggccctacctactatcagcgcttgaagcacatggtggatgac
aagatacactctcgagccagagggcctgtgcaaatcttgacgcgacagcctgtagaaggt
cgtagtcgtgatggcggacttcgtttcggggagatggagcgtgactgcatgatttcgcac
ggtatcgctggcttcctcaaggaacgattatttgaagctagcgatgcctaccgcttacat
gtttgtgacatatgtgggctgaccgcgatcgcaaacttaaaaaaacaaaatttcgagtgc
cgtgcttgcaagaacaagacagctgtttctcagttgtatattccatatgctgctaaactg
ctgttccaggagttgcaaagcatgaatatagctgctcggttgtatacagtttcctctggg
cggatacgagattga
DBGET
integrated database retrieval system
