Marasmius oreades (fairy-ring mushroom): E1B28_000819
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Entry
E1B28_000819 CDS
T08156
Symbol
RPB7
Name
(RefSeq) DNA-directed RNA polymerase II subunit
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03020
RNA polymerase
more03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
E1B28_000819 (RPB7)
09124 Replication and repair
03420 Nucleotide excision repair
E1B28_000819 (RPB7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_000819 (RPB7)
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_000819 (RPB7)
03400 DNA repair and recombination proteins [BR:
more03400
]
E1B28_000819 (RPB7)
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
E1B28_000819 (RPB7)
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
E1B28_000819 (RPB7)
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
E1B28_000819 (RPB7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-GeneID:
66069895
NCBI-ProteinID:
XP_043015394
UniProt:
A0A9P8AES5
LinkDB
All DBs
Position
1:2614390..2615352
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AA seq
170 aa
AA seq
DB search
MFFIKELTHTILLHPSYFGPRMLNFLESKLYSDVEGTCSGQFGYIIAVVSILDIGKGMVL
SGSGQAEFITRYRAIVFKPFKGEVVDGVVNNVTKMGFFADVGPLNVFVSHQLIHPDMKFD
PNSNPPSFASEEQIIEKNTKVRLKIVGTRVDATEIFAIGTIKEDHLGVIE
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgttctttatcaaagaactgacccacacaattctcctacatccgtcttatttcggccct
cgaatgctcaacttccttgaatcaaaactatactcggatgtcgagggaacatgttcaggt
caattcggatatatcatcgcagttgtctcgatattagacattgggaaagggatggttcta
agcgggagtggtcaagccgaattcataacaaggtatcgtgctattgtgttcaagccattt
aagggagaagtcgtggatggtgtcgtgaataatgttacaaaaatgggcttctttgctgac
gtcggacctttaaatgtattcgtatcgcatcaactgatacatcctgatatgaagttcgac
ccgaactcgaatccaccatcgtttgcttctgaagagcagattatagaaaagaacacgaag
gtaagactgaagattgtgggcacgcgtgtggacgccacggagatctttgctatcgggact
atcaaggaagatcacctgggtgttattgagtaa
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