KEGG   Marasmius oreades (fairy-ring mushroom): E1B28_001186
Entry
E1B28_001186      CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E1B28_001186
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    E1B28_001186
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     E1B28_001186
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     E1B28_001186
SSDB
Motif
Pfam: EXOSC1
Other DBs
NCBI-GeneID: 66070262
NCBI-ProteinID: XP_043015798
UniProt: A0A9P8AF97
LinkDB
Position
1:3465035..3465810
AA seq 185 aa
MMSDTLLPGQPIPLPKGPTPKLGTGIYTKDSQARASLVGITTYQGSTLTISRVRPHPPSP
NSIVLGSITRLSPSQALLSISVVDGVPLPPGEEFTGVIRSQDVRATEKDKVKIGACFRGG
DVVRGLVISLGDARSYFVTTARNDLGVIFATSEAGATMEPVSWQEMRCPKTGNIEKRKCA
KPEGL
NT seq 558 nt   +upstreamnt  +downstreamnt
atgatgtcggacactctacttcctggtcaacccattcctctgcccaaaggtcccacacct
aaacttggaactggaatatatacgaaggattcgcaagcaagggcaagtctggtgggtatt
acgacctaccaaggatctacgctgactatttcgcgtgtacgacctcacccaccctctccc
aactctattgtgctcggctcgatcacacgattatccccatcgcaagcactgctgtcaata
tcagttgtcgatggagttccattaccacccggagaagaattcactggcgttattcgttcg
caagatgtcagagcgacagaaaaagacaaagtcaaaattggagcttgcttcaggggagga
gatgtagtccgtggtcttgttatttctctgggagatgcacgaagttacttcgttacgacg
gcacgaaacgaccttggagtgatttttgcgacaagtgaagctggtgcaacgatggaacca
gtttcatggcaggaaatgcggtgtcccaagaccggtaatatcgagaaacgcaaatgtgct
aaacctgaaggtctatga

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