Marasmius oreades (fairy-ring mushroom): E1B28_001213
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Entry
E1B28_001213 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K06634
cyclin H
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03022
Basal transcription factors
more03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E1B28_001213
09124 Replication and repair
03420 Nucleotide excision repair
E1B28_001213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_001213
03400 DNA repair and recombination proteins [BR:
more03400
]
E1B28_001213
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
E1B28_001213
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
E1B28_001213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
Grg1
Motif
Other DBs
NCBI-GeneID:
66070289
NCBI-ProteinID:
XP_043015827
LinkDB
All DBs
Position
1:3522172..3523397
Genome browser
AA seq
354 aa
AA seq
DB search
MQDPSPPPIKKPLYEGSTQFKNWRYSHSRLAQIRSTLNEAAVSVIRTTFEAYEPGSSANV
TFLTADEESLLVTFYATMITQICGRFRFPEEVEATAVSYLKRFYLKNTVMDWHPKNVMLT
AVFLATKTTNNPISLEVYTSHIPKASASDVLDLEFLIAQSLGFEFAVWHAHRALWGIWLD
LQSLPDTTSNSEATRSPVYTSAVSHVRSSRLTDAELVYTPSQVALAALSMADRDLALKWL
KSKQDKLRSDADHSPNIMESIDNITNLIRKHGHAPDVEAVREVDRRLKLCKNPEKVVGTK
AYLARQAEEDKKAEDRRIRKADVQKEATTDGDPFGEVLARSKPGLVDYDDDDDD
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatccatctcctccgcccatcaagaaaccattatacgaaggaagcacacaattc
aagaactggagatactcccattcacgactagctcaaatccgctcaacgctaaatgaagcc
gccgtctctgtaattcgaaccactttcgaggcatacgaaccaggctcctcggctaatgtt
accttccttaccgcagatgaagaatcacttctcgtaactttttatgctaccatgatcact
caaatatgcggccggttccgttttccagaggaagtagaagcaacggcagtctcgtatttg
aaaagattctacttgaagaacacggttatggactggcatccaaaaaacgttatgctgact
gctgtgtttctcgccaccaaaacaactaacaacccgatatcgttggaagtctacacctca
catatacccaaggcatctgcttcagatgtgctcgaccttgaattccttatcgctcagagc
ttgggattcgaattcgctgtttggcacgctcatcgtgccctgtggggtatttggctcgac
cttcagagtctcccggacacgacttcgaattctgaagccacaaggagtcctgtctacacc
tcagcagtctcacatgttcgttcttctcgattgacagatgcagaacttgtgtatacgcca
tctcaggttgcattggccgccctctccatggcggaccgagatctcgctttaaaatggttg
aaatccaagcaagacaagcttcgttcagatgcagatcattcgcccaatataatggaatcg
atagacaacattaccaacctcattaggaagcacgggcatgcccctgacgttgaggccgta
cgagaagtggacagacggctaaagctctgcaagaacccagagaaagtcgttggcaccaag
gcctacctcgcgagacaagcagaagaagacaaaaaagcagaggacaggcgtattcgtaaa
gcagatgtacagaaggaagctacaacagacggggatccatttggtgaggttctcgctcgc
tccaaacctggacttgtcgactacgacgacgacgacgacgactag
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