Marasmius oreades (fairy-ring mushroom): E1B28_001509
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Entry
E1B28_001509 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_001509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
E1B28_001509
Enzymes [BR:
more01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
E1B28_001509
Spliceosome [BR:
more03041
]
Complex C
Other components
Step II factors
E1B28_001509
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
S1
AAA_22
ABC_tran
nSTAND3
T2SSE
AAA_19
Ploopntkinase3
AAA_16
Flavi_DEAD
SLFN-g3_helicase
AAA_30
PhoH
nSTAND_NTPase5
NB-ARC
TrwB_AAD_bind
AAA_7
Motif
Other DBs
NCBI-GeneID:
66070585
NCBI-ProteinID:
XP_043016157
UniProt:
A0A9P8AFH3
LinkDB
All DBs
Position
1:4167533..4171322
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AA seq
1156 aa
AA seq
DB search
MADSDLYNLEFLSLVSKITQEIENHTGVNDKVLAEFVISLHDESSKSLSEFKSKLKGVGA
DFPDSFVESVDRLILSMHPKHKKWSTTASNGTVSNGGELTEEEKKRRLFPGLALKDQEVS
PGVSDDVFLKELGELVSGKKRPSELDRSPKRRRRDSRSPPPPPPPRARSPSPPRGRAHDD
RRGRGGRSALDERPILFKIYNGRISGLREFGAFVTVEGVAGRVEGMVHVSNIQTGSRVNS
ASDLLSRGQNVKVKVISVAGSRVGLSMKDVDQVTGRDLTPHLRIKSEAEMEEERVRTARA
SSGANSVPLNSRDDAPKRSAKRLTSPERWEIKQLISSGALDAADYPDLDEDMHNPAAQAE
VEEELDVEIREDEPPFLAGQTKRTLDLSPVKIVKAPDGSLNRAALNGASLAKERRELRQQ
EANEKADSEARDFSQPWLDPMARDTDKVFAQDLRGNLRGQKAGEVPQWREQTFNKATTYG
EITNLTITEQRRRLPIYKLREPLLKAIEEHQILIVVGDTGSGKTTQMTQYLAEAGYADRA
RIGCTQPRRVAAMSVAKRVSEEVGCRLGQEVGYTIRFEDCTSPETRIKYMTDGMLQRECL
IDPLCNNYSVIMLDEAHERTIATDVLFGLLKKAVKRRPDLKLIVTSATLDAEKFSKYFYG
CPIFTIPGRTFPVEILYTKEPETDYMDASLITVMQIHLSEPPGDILLFLTGQEEIDTACE
ILFERMKALGPKVPDLLILPIYSALPSEVQSRVFDPTPPGVRKVVIATNVAETSLTIPNI
YYVIDPGFSKQNAYDPRLGMDSLVVMPISQAQARQRSGRAGRTGPGKCYRLYTEAAFQNE
MLPNSIPDIQRTNLATTILQLKAMGVNDLLSFDFMDPPPAQTMLTALESLYALSALDDEG
LLTGLGRKMADFPMEPPLAKMLIASVELGCSEEILSIVAMLSVQTVFYRPKEKQGQADSK
KAKFHQPEGDHLTLLTVYNGWKNANFSNPWCYENFIQARSMRRAQDVRKQLLGIMDRYKH
DIISAGKDYNRIRRAICSGFFRHAAKKDPQEGYKTLVEGTPVYIHPSSALFNRAPEWLIY
HELVLTTREYCHNVTAVEPKWLVEVAPQFFKVADAHKISKRKRQEKIEPLFNKYEKPDEW
RLSKIKRSTRSSQTFG
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atggccgattctgatctttataacctcgaattcctttctcttgtgtccaagatcacccag
gaaattgaaaaccatactggagtcaacgacaaagtacttgccgaattcgtaatctccctc
cacgatgaatccagtaaaagtctttccgagttcaagtcgaagctgaagggtgttggggct
gactttccagattccttcgtggagagtgttgaccgacttattctcagcatgcacccaaaa
cacaaaaaatggtctaccactgcttcgaatggaactgtttcgaacggcggggaattgacg
gaggaagaaaagaagaggcgactatttccagggttggcgctcaaggaccaggaagtttcg
cctggtgtttccgacgatgtgtttctgaaggagcttggggaacttgtctcggggaagaaa
cgaccatctgaattagaccgttcacccaaaagacggcggagagacagcaggtctcctccc
cctccccctcctcccagagcaagaagtcccagtccgcctcgaggtcgtgctcatgatgat
agaaggggtagaggcggccgttcggctctcgatgagaggcctatattattcaagatatat
aacggccggatatccgggctgcgagagtttggcgcgtttgttacagtcgaaggagttgcc
ggtcgggtcgaaggaatggtccatgtctctaatattcaaactggttcccgagtcaactct
gcgtcagatctcttgagcagaggacagaatgtaaaggtgaaggttataagtgttgctgga
agcagagttggtctttcaatgaaagacgttgaccaagtcactggtcgagacctcacccct
catcttcgcatcaagtcggaagcagagatggaagaagaacgtgttcgcaccgcccgcgcc
tcatcaggtgccaactccgtccccctcaactcgcgcgatgatgcaccaaaacggtctgca
aagcgattgacctctccagaacgttgggaaattaagcagttaatttcttctggtgctctc
gacgccgcggattatcccgacctcgacgaagacatgcataacccggcagcacaggccgaa
gtagaagaagagcttgacgtggaaattcgagaggatgagccgccattcttggctggtcaa
accaaacggacgcttgacttgagtccagtgaagatagtgaaggcaccagatggatcactt
aaccgtgctgctctgaacggagcttcattagccaaagaacgtagggaactgcgacagcaa
gaggccaacgaaaaagcggattccgaggcccgagacttcagtcaaccatggcttgatcct
atggcccgagacacggacaaggtgtttgcgcaggacctcagagggaatctgagaggacag
aaggcaggggaagtaccgcaatggagggaacagacattcaataaagcaacaacttatggt
gaaattacgaatttgaccatcacagaacaacggagacggttaccaatctacaaactacgc
gagccattgctcaaagctatcgaagagcaccagattcttattgtcgtcggtgataccggg
tccggcaaaacaacgcagatgacgcagtacctcgcagaggccggatacgcagatcgtgct
cgcataggttgcactcagcctcgtcgtgtcgctgccatgtcggttgccaaacgtgtatcc
gaggaggttggctgtcgactcggtcaagaggtcgggtatacgatacgttttgaggattgc
accagtccggagactcgaataaagtacatgacggatggtatgctccagcgagagtgtctc
atcgatccgttgtgcaacaactactcggtaattatgttggacgaagcacatgaacggaca
atcgccacagatgttctgttcggtcttctcaaaaaggccgtcaagcgaagaccagacctc
aagctgattgtgacttcagcgacgttggacgctgagaaattctccaagtacttctatgga
tgccccatctttaccatccccggtcggacattcccagtcgaaatactctatacaaaggag
cccgagacagactatatggatgcctctctcattactgtcatgcagattcacttatcagag
ccccctggtgacattcttctcttcctgaccggacaggaagaaattgacacggcttgtgaa
attttgttcgaacgcatgaaagccttgggaccaaaagtgcccgacctccttattctccct
atctactctgccctaccatccgaagtgcagtcacgcgtttttgatccaacccctcccggt
gttcgcaaggtggtcattgcaacgaacgtcgccgaaactagcttaacgattcctaacatc
tactatgtcatcgatccaggattttcgaagcagaatgcctacgatcctcgtctaggtatg
gactctctcgtggtgatgcccatttcacaagcgcaagcacgtcagcgctcgggtcgtgca
gggcgcactggtcccggaaaatgttatcgtctctatactgaggctgcgtttcaaaacgag
atgcttcccaactccatcccggacattcagagaacgaatttagcgaccacgattcttcag
ctcaaagcgatgggagtcaacgaccttctttcctttgattttatggacccacctcctgcg
caaacaatgttaacagcacttgaatccctctatgccttatccgcgcttgatgatgaaggt
cttctcacggggctaggtcgcaaaatggcagatttccctatggaaccaccattagccaag
atgctgattgcatccgtggagttggggtgttctgaagagattctttctattgttgcaatg
ttgtctgtccaaacggtcttttaccgcccgaaagaaaaacagggtcaggctgattctaag
aaggccaaattccaccaacccgaaggtgatcatctcaccctgctcactgtgtacaacggc
tggaagaatgccaacttctcaaatccgtggtgttacgagaacttcatccaagcacgtagt
atgaggcgagcgcaggacgttaggaaacaactgctcggtatcatggacagatacaagcat
gatattatatctgctgggaaagattataaccgtatcaggagggcaatttgttcaggcttc
ttccgacatgcggcgaaaaaggatccgcaagaagggtacaagactcttgtggagggaaca
cccgtgtacatccatccatcttcagcattgttcaacagagctcccgaatggttgatatat
cacgaacttgttcttactaccagggagtattgtcataacgtgacagcggtggaacctaaa
tggctggtggaagttgcacctcagttctttaaagtcgccgatgcgcacaagatcagtaaa
cggaaacggcaggagaagatcgaaccccttttcaacaagtatgaaaaaccagacgaatgg
cgattatcgaagatcaagaggagtactcgctcgagtcaaacgtttggttga
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