Marasmius oreades (fairy-ring mushroom): E1B28_001522
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Entry
E1B28_001522 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
E1B28_001522
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
more03009
]
E1B28_001522
Ribosome biogenesis [BR:
more03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
E1B28_001522
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Utp13
EIF3I
Beta-prop_EML_2
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_Vps41
Beta-prop_IFT140_1st
WD40_like
Beta-prop_DCAF12
Beta-prop_WDR35_TULP_N
Beta-prop_IP5PC_F
WD_LRWD1
Beta-prop_NWD2_C
Beta-prop_HPS5
VID27
WD40_CFAP43
Motif
Other DBs
NCBI-GeneID:
66070598
NCBI-ProteinID:
XP_043016172
UniProt:
A0A9P8AFH8
LinkDB
All DBs
Position
1:complement(4202683..4205701)
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AA seq
916 aa
AA seq
DB search
MVVDVKRAKLKTAFKNAKTISPLYTSGPVTVTPDGRIIVTCVGEEILLTEISTGTQICRC
LGDTESITALAITPSSTHLLVFTSSLSLRIFEIPASLSSTSPSTISPVRVIARAHEAPVH
VCKADPTSTYLASGSADGVVKVWHIAQGYVTHLFKGHGGVVSALAFNYPQDSSSLTRQDS
MQLFTASVDTRIRVFELLAENRTSKPFAVLEGHVSVPRGLDVSSDGKWLISGGRDSVVLV
WDLTPMKNRQSLKESSSKKGKDKTAAPLLAKTIPVLERVEAVGLLPAEESSSSSTPASGG
DSLSFFTGGANGVIKVWDAKQGATLFSLGKEQSQPLNEDMEEQRQIVHALYLPQCSTLVS
VHADQNILFHSLSRRSLTRQLIGFNDEIVDMTFLSPNENCDSHIALATNSSLIRVYSASN
MDARLLEGHKDIVLCLDKGMQGRILASGGKDRSARLWTTLPQSSGDPEQWGYRCIGICEG
HAESVGAIALARNTSVDDESGIPFMFTGSQDRTIKMWDLSVVPSPSSPSSSRDQPVKCKS
LSTHKAHDKDINSLDVSPNNRLLVSGSQDRTAKVFQIDYSGKGTSLSGSIKLLGVCKGHK
RGVWTVRFGREERVLATGSGDKTIRLWNLEDFSCVKTFEGHTNSVLRVDFLNAGMQMVSS
ASDGLVKIWNVQTEECMTTLDNHEDKVWALAVSTDERKILSGAADSIVTFWEDCTEEQEE
EQEKKRADLVLKEQDFQNYLSLHDYRRAIELALAMAQPGRLLSLFREIGSVELESSESEA
SSLTGSSAVDEVLRTLCGSDLARLLKYARDWNANAKTSTISQNVLYAILKLRPAGDVADA
FMRDGQNVENLDGESQLMASKGSTVLKEWIDGFIPYSERHLARYDKLLQDSYMVDFILSE
MDGGLFDGETNDMEID
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggtagtggatgtgaagcgagccaagttaaaaaccgcattcaagaatgcaaagacaata
tcacctctgtatacctctggacctgttactgtaactcctgatgggagaatcatcgtaact
tgtgttggggaagaaattctgttaacggagatctctacgggaactcaaatatgtcgttgt
ttgggtgacaccgaatccatcaccgctctagctataacaccctcctcgacccatctcctt
gttttcacctcatcactatcgcttcgtattttcgaaataccggccagcttgtctagcacc
tccccatcgacaattagtccagtacgagtgattgctcgtgcgcatgaagcacctgtccat
gtctgcaaagcagaccccacctcgacttacctcgcttctggctctgcagatggtgtagtc
aaagtatggcacatcgctcaaggctatgttacacacctattcaagggacacggtggggtc
gtgagtgcactagcattcaattatccccaagactcctcatcacttactcgacaagactcg
atgcaactcttcacagcgtctgtagacactcgtatacgtgttttcgagctgcttgcagaa
aatcgaacttcaaaaccgtttgcagtccttgaaggacacgtctctgttcctcgtgggttg
gacgtttcttcggatggtaaatggcttattagtggtgggagggattcggtggtgttggta
tgggatctaacacccatgaaaaaccgtcagtcattgaaggagagcagcagtaaaaaggga
aaggataaaactgctgcaccattattggccaagacgataccggtgttggagcgtgtcgaa
gcagttggtttactgcctgcagaggaaagttcaagttcgtccacgcctgcttcaggtggt
gatagtttgagcttcttcacgggtggtgcaaatggcgtcattaaagtttgggatgcaaag
cagggagctaccttattctcgctcggaaaagagcaatctcagccgttgaatgaggatatg
gaggagcaacgacaaattgtacacgcactgtaccttcctcaatgctcgacactcgtatca
gtacacgccgaccaaaatattctcttccactccctctctcgccgttccttaactcgtcag
ttaatcggtttcaatgacgagatcgtcgacatgaccttcctctccccgaacgagaattgc
gactctcacattgcactagcgaccaattcatccctcattcgtgtttattctgcatcaaac
atggacgcacggctactagaaggacacaaagacatagttttgtgtttggacaagggaatg
caagggcgtatcctagcaagcggtggtaaagatcgatcagcacgactatggacaactctc
ccgcagtcttctggagatccagagcaatggggataccgttgtatagggatttgcgaagga
catgctgaaagtgttggcgctatcgcgttggctcgtaacacctccgttgatgatgaaagt
ggaattccgttcatgtttactggtagccaagatcgaaccatcaaaatgtgggatctatca
gtggtcccttcaccctcctccccatcttcttcgagagatcagcctgtgaagtgtaaaagt
ttgtcgacacataaagcccatgacaaggatatcaactcactagatgtctcccccaataat
cggttattagtatcaggctctcaagaccgaacagctaaagtcttccagattgattattct
ggaaagggtacctcgttatccgggtcgataaaactacttggcgtatgcaaaggacataaa
cggggtgtttggactgtcaggttcgggagggaagagagggtattagcaacaggcagtggt
gataagactattaggttgtggaacttggaagacttttcgtgtgtgaagactttcgaaggg
cacaccaactcggtgctgagggtcgacttcctgaatgccgggatgcagatggttagttcg
gcatctgacggattggtcaaaatttggaatgtccagactgaggagtgcatgactactctt
gataatcacgaggataaggtgtgggcattggccgttagcacagacgagagaaagattctc
tctggcgctgcagactcgattgtgacattctgggaggattgcacggaagaacaagaggaa
gaacaagaaaagaaacgcgcggatctggttctgaaagaacaagacttccaaaactacctt
tctcttcacgactatcgaagggctatcgagctggcgcttgcaatggcacaacctggccgt
ttactatcgctattcagagaaattggttccgtggaacttgaatcgtcagaatccgaagcg
tcctctttaacggggagttccgcggtcgacgaagtgttgcgaacactgtgcgggtctgac
ctggcaaggctcctcaaatacgcacgggattggaacgcgaatgcaaagacaagcactata
tcgcaaaacgttttatacgcgatattgaagttacgccctgcgggggacgttgctgatgcg
ttcatgagggacggtcagaatgtggaaaatcttgatggggagagccaactgatggcatca
aaagggtcgacggtgttgaaagagtggatcgatggattcatcccttacagcgagagacat
ttggcgaggtacgataagctactgcaggacagttacatggtggatttcattctgtcagag
atggatggtgggctgtttgatggggagacgaatgatatggagattgattag
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