Marasmius oreades (fairy-ring mushroom): E1B28_001673
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Entry
E1B28_001673 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
E1B28_001673
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_001673
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
E1B28_001673
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
UBM
Motif
Other DBs
NCBI-GeneID:
66070749
NCBI-ProteinID:
XP_043016340
UniProt:
A0A9P8AFY0
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All DBs
Position
1:complement(<4614176..>4616686)
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AA seq
607 aa
AA seq
DB search
MMLEDDDDEYLYGASTKPQTPTQVQPTSSSAASVSHPKPVENTLATNGIVSQLEAAAESQ
VEAQELLHDRQVSPGTPQQESTPEDGSDADAEGVEESGEEEDEDIEIIIDTERAPRSVDF
RPNAQRASQNRNISSSHPTPAKASQPTLTTEYTPMQRGAVGTPSKPLPGAGGSSSTIAAS
SSNLSVPASFITTIPDSSEDVPAVDPSTLPPAIAPPSHPKIDPNETGMLDGRSIFEVDIG
AMSEKPWRRAGSDISDWFNYGFDEISWEAYCYRRREMGDVAGIMKVNVLNFSGMQEDQLA
ALPPEVRQMVMTGTSAMMNQMNQINQAVAGAGGGGMGVDMGMNPGMMNPGVMMDMGMMNP
MAGMGMNGDMGNMGMGQMGMTMDGQPQGVPGGGMGGGMGGGMGGGMPGNSTPEQGGMGMM
QEGGFSGAMGMGMEFGMQDNQMYPGMEQGQPPAGPAAGNVVQVSGPGARPGGATPQPFSG
RGRGVTPVPVGGRGRVTPFPARGRGRGMYGPGEGAPVAPVRPASPLPPNVPTGPRNQNKY
KDRDGNAPAVDGLDYGGDRDRDSREKDYRDRDRGEKTRTPSREPEDRSSRKRRSSPSLDD
GRGSKRR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagaggacgacgacgacgaatatctttacggagcctccactaaaccacagact
ccaacgcaagttcaaccaacatcgagtagcgctgcctcagtctctcacccaaaacccgtt
gagaacactctcgccaccaacggaatcgtctctcaattggaagctgcagcagaaagccag
gttgaagctcaagaacttctgcatgaccggcaagtatctcctggcacgccacagcaggag
tcaacaccggaagatgggtcagatgcagatgcagaaggagtagaggaaagcggagaagaa
gaggatgaagatattgaaattatcattgatactgaacgggctccacgttcagtggacttt
cgtcccaatgcccaacgtgcctcccaaaaccgaaacataagctcctcgcatcctacacca
gcaaaagcatctcaaccgacgctcacgaccgaatacacacccatgcagaggggtgcggtt
ggaacgccctctaaacctctgcctggcgctggcggatcatcctcgactatcgcagcttca
tcatcaaatctttctgtgcccgcctctttcataacgacaataccggattcttctgaggat
gttccggcagtcgatccatcaaccttaccccccgcaatagctccaccttcgcatcccaaa
attgaccccaatgaaaccggtatgttggacggtcgttccatattcgaggtcgacattgga
gctatgtctgaaaagccctggcggcgggccggttccgatatcagtgactggttcaactat
gggttcgatgagattagttgggaggcttattgttacaggagaagagagatgggagacgtt
gctggaataatgaaagtgaacgtcctgaatttctctggaatgcaagaggaccagttagcg
gctctaccgcccgaagttcgacagatggttatgacggggacatctgctatgatgaaccaa
atgaaccagattaaccaggctgtggcgggtgctgggggcggtggaatgggtgtagatatg
ggaatgaatccagggatgatgaatccgggagtcatgatggatatggggatgatgaaccca
atggccggcatgggtatgaatggcgacatggggaacatgggtatgggtcaaatgggcatg
acgatggacgggcaaccccagggtgtccccggcggtggtatgggcggtggtatgggcggc
ggtatgggtggcggtatgccgggaaacagtacgcctgagcagggaggtatgggtatgatg
caagaaggtgggttctcgggtgcaatgggaatgggaatggagtttggaatgcaggacaat
cagatgtaccctgggatggaacaaggtcaaccacccgctgggcccgcagcagggaatgtt
gttcaagtctcggggcctggtgcgcggccagggggagcaacaccacaaccgttttctgga
agaggaagaggcgttacaccggttccggtgggtgggcgtggacgagtgacaccattccca
gcaagaggcagaggcagaggaatgtatggtcctggcgagggtgcccccgttgcaccagta
cgacccgcctcgccactccctccaaatgtacccactggtccgcgtaatcaaaacaaatac
aaggaccgagacggaaatgcgcctgctgtagatggtctggattatggcggtgatcgggat
cgagatagcagagaaaaagactacagagacagagatcgaggagaaaagacgagaacacct
agtcgagagccagaagatagatccagtcgaaaacgtcgaagctcacctagcctggatgac
ggtcgtggttccaagcgacgatga
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