Marasmius oreades (fairy-ring mushroom): E1B28_002592 Help Entry E1B28_002592      CDS       T08156                                  Symbol SYF1 Name (RefSeq) pre-mRNA-splicing factor syf1   KO K12867   pre-mRNA-splicing factor SYF1 Organism more  Marasmius oreades (fairy-ring mushroom) Pathway more03040   Spliceosome Brite KEGG Orthology (KO) [BR:more00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     E1B28_002592 (SYF1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:more03019]     E1B28_002592 (SYF1)    03041 Spliceosome [BR:more03041]     E1B28_002592 (SYF1) Messenger RNA biogenesis [BR:more03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      E1B28_002592 (SYF1) Spliceosome [BR:more03041]  Complex B   Other components    Prp19-related factors     E1B28_002592 (SYF1)  Complex C     E1B28_002592 (SYF1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf TPR_19 TPR_2 TPR_12 ARM_TT21_C TPR_16 NRDE-2 TPR_MalT CCDC84 ARM_TT21 Motif Other DBs NCBI-GeneID:  66071668 NCBI-ProteinID:  XP_043003124 UniProt:  A0A9P7RPE6 LinkDB All DBs Position 10:1568344..1571675 Genome browser AA seq 982 aa AA seqDB search MPSVAQKRPSLDELQSLFPLTNPIPHPKSNPDLLTSKDLHREEDLLRNPQSFRAWWTAIH TTRELYAAQSKIEKHELPEEISALLGPLSTPYARLTLQRLTYLYESALVQFPNSFKLWKS YLTMRMSYVLGKQVIKKRAGGRKKFPEMKDALVDEKEDLERWEGGLNGAIGWEEWKSLVA VFERALMWLPKLPRLWLMYSSIFFHPLCPSPLSHSHARRTFDRALRTLPPSLHQRIWVRY LLWAEQRGGATTVAAFRRYIAIDPSVTEHYTDLLLSPVLGSPRPLEAAKLLLSLARKAAR GEYSSPEGKSPYQLLEDWINLVEKFSDDVGLDVEETIESHAAAAKAEEEKEAMKVEDQEP ASVDGQLIRVAGPPVAVDADGNALPAYDEDEDPSSPRRINIEQVIEKDGFSVYKDQAGRL WTGLATYWIKRSEFDRAKEMFEKGLASVLTIRDFTQVFDAYAEFGESLISALMDSLNDEE DEEEAAETEQELDVHMKGFEELMDRRPFLVNDVLIRRNPNDVQEWEKRVALWGQDDKKVA ETYTKALETIVPRKATANLHRLYINFAKFYEEGGTTGEAEEDLDSARKILENATKVNFKA VEDLAEVWCEWAELEIRQENHDEAIRVLQRAAAIPKDTKINYHDHSLSAQTRLFKSLKLW SFYVDLEESLGTVETTKKVYDKILELRIANAQIIVNYAAFLESNKYFEESFKVYERGVEL FTFPVSFEIWNIYLSKFVKRYGGTKVERARDLFEQALEKCPAKSCKPLFLMYGKFEEEFG LIKRAMSIYERGTQVVADEDKFEMFTIYIAKATANYGLPATRPIYERALELLPDRQTAEM CLRFAALERKLGEIDRARAIYAHASQFCDPRVNEKFWKEWNDFEIETGSEDTFREMLRIK RSVQAQFNTEAHYIAAQTIAAKNGAEKKVEIAEAPDAMAAAERQVGGFVAATKTALYQPP EDASAAVAANADEIHISDDEDV NT seq 2949 nt NT seq  +upstreamnt  +downstreamnt atgccgtctgtagcccaaaaacgtccttcgctggacgagctccagtccctcttccctctc acaaatccgattccccacccaaagtcgaacccagaccttctcacttccaaagacctgcac cgagaagaagatcttttacgaaatcctcaatcttttcgagcatggtggacagcgatacat acgactcgggaattatacgctgctcaaagcaaaattgaaaagcacgagcttccagaggag atctcagctctacttgggccactttcgacgccttatgcgcgcctcactcttcaacgcctc acctacctttacgaatcggcactcgtgcagtttccgaactcattcaaactatggaagtcc tatttgacgatgcgcatgtcatacgtgttggggaaacaagtcatcaaaaagagagcgggt ggtagaaagaagtttcccgagatgaaggacgcgttggtggatgaaaaagaggaccttgag cgatgggagggagggttgaatggggccatcgggtgggaggagtggaaatctttggttgcg gtctttgaacgtgcgctgatgtggttgcccaagctaccgcgactatggttgatgtactct tccatctttttccaccctctatgcccctcaccactttctcattcgcatgcacgaaggacg tttgacagagcgttgaggacgttgcctccatctcttcaccaacgtatatgggtacggtat ttactgtgggccgagcaacgaggtggtgctaccactgttgcagcgtttcgtcgatacatt gcgattgaccctagcgtaacggaacactacaccgaccttcttctctctccggtgttgggt tctcctcggccactcgaggctgctaagctgcttctttcgttggctcgtaaagctgccaga ggggagtactcaagcccggagggtaaaagcccttatcaacttttggaagattggatcaat ctggtggagaagttttccgatgatgttggtttggatgtcgaagaaactatagaatcgcat gctgctgctgcgaaagcagaagaagaaaaggaagcgatgaaggtagaggaccaagagccg gcgtctgtcgatggacaacttatacgcgtagctggtcctcctgttgcggttgatgcagat ggaaatgctcttccggcttatgatgaagatgaggatccgtcgagccctcgcaggataaac attgaacaagttatcgagaaggacgggttctctgtctataaggatcaagctgggcgactt tggacgggcttggcgacctattggatcaaacgttcagaatttgaccgtgcaaaagaaatg ttcgaaaaaggtctcgcttcggttttgacaattcgagattttacacaagtattcgatgct tatgctgaattcggagagtctttaataagtgccttgatggacagtctcaacgacgaggag gacgaggaggaggctgctgagacggagcaagagctggacgtacatatgaaggggtttgag gagttgatggacagacggccgttcctagtgaacgatgtcttgattaggcgcaatccgaat gatgtgcaggagtgggagaagagggttgcgttgtggggtcaagacgataaaaaggtcgca gaaacttacaccaaagctcttgaaacaattgttccgcggaaagcaactgccaaccttcat agattatacattaattttgccaagttttacgaggaaggtggcactactggcgaggctgaa gaagatctcgatagtgcacggaaaatcttggaaaatgctaccaaggttaacttcaaagct gtggaagacctcgcagaagtgtggtgtgaatgggctgaattggaaattcgacaggaaaat cacgatgaagccatcagggtcctgcagagggctgctgctattcccaaggacaccaaaatc aactaccacgaccattcattatcagcccagacacgtctattcaagtccttgaaactatgg tcattttacgttgatctagaggagtcgttaggtaccgttgagacgactaagaaagtgtac gacaagatccttgagctccggattgcgaacgcacagatcatcgtaaactatgctgctttc ttggagagcaacaaatacttcgaagaaagcttcaaggtatacgagcgaggcgtcgaactc ttcaccttcccggtatcctttgaaatctggaatatttacctctccaaatttgttaaacgc tatggcggcaccaaagttgaacgtgcaagagatttgtttgagcaggcgttagagaaatgt cctgcaaaatcttgcaagcctcttttcctcatgtacggcaagttcgaagaggagtttgga ctgattaagcgtgcgatgtcgatctatgagcgtggaactcaagtggtggccgatgaagac aagtttgagatgttcaccatctacattgccaaagcgaccgctaattacggcttgcctgca actcgacctatttatgagcgagctcttgaactactccctgatcggcagaccgcagaaatg tgtctacgatttgcagccttggaacgcaaactcggtgaaatcgaccgtgcacgggctatc tacgcccacgcatctcaattctgcgatcccagagttaatgaaaagttctggaaggaatgg aacgatttcgaaatcgagacgggatcagaagacaccttccgagagatgcttcgaatcaag cgtagtgtccaggcacagttcaatacggaggcacactacatcgccgctcagacgatcgct gctaagaatggggcggagaaaaaggtggagattgcagaggcgccagatgctatggcagcc gctgagagacaggtaggaggatttgttgcagcaacgaagactgccctgtaccagccgccg gaggatgcttccgctgcagttgcggctaatgcagatgagatacatatatcggacgatgag gatgtttga

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