Marasmius oreades (fairy-ring mushroom): E1B28_002618
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Entry
E1B28_002618 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03022
Basal transcription factors
more03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E1B28_002618
09124 Replication and repair
03420 Nucleotide excision repair
E1B28_002618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_002618
03400 DNA repair and recombination proteins [BR:
more03400
]
E1B28_002618
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
E1B28_002618
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
E1B28_002618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_UBOX
zf-RING_4
VIT1
zf-rbx1
ROK
DUF6591
PRORP
TRAF3_RING
Methyltransf_14
Motif
Other DBs
NCBI-GeneID:
66071694
NCBI-ProteinID:
XP_043003151
UniProt:
A0A9P7RP00
LinkDB
All DBs
Position
10:complement(1671438..1672908)
Genome browser
AA seq
400 aa
AA seq
DB search
MSRPNYGWLQGTTVRKSGITSSSSNATRSSTPQVQSTSSTVYGGGVKDPSGRTAEYFSMD
DQCPVCRSDRYLNPKLRLLVSSCYHKMCESCIDRLFTLGPAPCPICQKVLRKLAFSPQTF
EDLGVEKEVAVRRRLAKEFNKRREDFDDLRSYNDYLEEVEDIAFNLINNINVQETEARVA
TYKAANAALTALNLQREEAYALALKEQEELDRKEREARAAQLAHEQQLEREEKEREQREI
IDKLETSQKDARQVVAKSRANAAKRLAAVSGSGKPSGLAAVGFGFGADYAKLLKTRTTGK
KASNSVPDEPHIPLQDEWYAYDDLFVFKDGYDDVVSEAVRKDREGIMRAGGYMVEEAWQR
ALRSAVAGLDISPLEGLTERGVPEPTGPVDSGTDVVMVSV
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgaccaaactatggatggcttcaagggactaccgttcgcaagtcgggaatcacg
tcctctagttcgaatgcaaccaggtcctcaactccccaagtccagagtacttcctccacc
gtttatggtggaggtgtgaaggatccctccggtagaacggccgaatacttttcaatggac
gatcaatgcccggtctgccgaagtgacagatatttaaacccaaagttaagacttcttgtg
agctcatgttaccataaaatgtgtgaatcctgtatagatcgtttattcactcttggtcca
gcaccatgtccaatatgtcagaaagtgttgcgcaaattagcattctcacctcaaaccttt
gaagacctgggggttgagaaagaagtcgcggtaaggaggcgtttagcaaaagagttcaac
aaacgacgcgaagatttcgacgatctacggtcctataatgactatctagaagaagtggaa
gacatcgcatttaatctgatcaacaacatcaacgtccaggagactgaagcccgcgtcgcg
acctacaaagctgcaaatgcagccttgaccgctctcaaccttcaaagagaggaggcgtat
gcacttgcgcttaaggaacaagaagaactggaccgaaaggaacgtgaagcccgtgcagct
caactggctcacgaacaacaactagaacgtgaagagaaggaacgagaacaacgcgagata
attgacaaactagagacaagtcaaaaggacgcgcgccaagtcgtcgccaagtctcgagca
aatgcggcaaagcgactcgctgctgtatctggctcagggaaaccttctggactggctgct
gtgggattcgggtttggggctgattatgccaagttgctcaaaacaagaacgacaggaaag
aaggcatccaactcggttcccgacgagccccatattccgctccaggacgagtggtatgcg
tatgatgatctatttgtcttcaaggacgggtatgacgacgttgtgagtgaagccgtaagg
aaggatcgagaaggcattatgagggccggaggctatatggtagaggaggcgtggcagaga
gcattgaggtctgcagtcgcagggttggatatttcacccttagagggcttgactgagaga
ggagtaccagagcccaccgggccagtggacagcgggacagacgttgttatggtttctgta
tga
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