Marasmius oreades (fairy-ring mushroom): E1B28_003370
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Entry
E1B28_003370 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12589
exosome complex component RRP42
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_003370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_003370
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
E1B28_003370
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
E1B28_003370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
66072446
NCBI-ProteinID:
XP_043002303
UniProt:
A0A9P7UJR6
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Position
11:complement(1804411..1806296)
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AA seq
344 aa
AA seq
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MALVSVSKAEKSYIQAGILASPAHRLDGRSLHDFRSIALETGVAPLANGSARLKIGRNPQ
DGSGGTEVLAAVKLEVENVEGGTGGVDGGRIVCSVSCSPSAYPNISSGALDDLQHDYTDV
INQTLSHPSLHPANLGILPRKKSWLLNLDIVVLADAGNIYDALFMSARAALWDTKVPRTR
SIEYKARKSGPSAKDKDMVGGSGDMDVDQDTVSGFDTRHTSGAIDFELPDYWDEGEILDG
RNRWPLCVSLNLIPPAHFLDATLQEEASASIRVLLMFSFASPGQPTLQGMRMLGPGELSM
ASLKALIKEGGKYANEMHSALTSKLRDEDLRRNQKAREKFVSRI
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggccttggtatcggtctcgaaagcagaaaaatcatacattcaagccggaattctcgcg
agtcctgcccatcgactggatggtcgttctttacatgactttcgctcgatagcactggaa
acaggtgtagcacccttagccaacggtagtgcgcgcctgaaaatcggtcgcaatcctcag
gatggaagtggaggcacagaagtcttagctgccgtaaagctcgaagtcgagaatgttgaa
gggggcacaggtggagtcgatggaggaaggatagtttgtagtgtttcttgttctccttcc
gcatacccaaacatttcttctggggccctcgacgatctacaacatgactacactgacgtt
atcaaccaaacactttcacatccgtctttgcatccggccaatcttggaattctccctcgg
aaaaagtcctggcttttgaaccttgacatcgtcgtcttggctgatgctggaaatatctac
gacgcgcttttcatgtctgcacgtgctgcgttatgggataccaaagttccaaggacgaga
agtattgagtacaaggcaaggaaaagtggtccgagcgctaaagacaaagacatggtggga
ggctccggtgatatggatgtggaccaggatactgtcagtggcttcgatactagacacaca
agcggggctatcgattttgaactccccgattattgggatgaaggtgagattctggatggt
cggaatagatggccattgtgtgtttccctgaatttgatacctcctgcacatttcctggat
gcaacattgcaagaagaagcttcagcatcgatacgagttcttttgatgttctcatttgct
tcacctggtcaacccactctacaaggcatgcggatgttaggacccggcgaattgtctatg
gccagtttaaaagcgctcattaaggaaggggggaaatacgctaatgaaatgcactccgct
ctcacctcgaaattaagagacgaggatttacgacgtaaccagaaagctagagagaaattt
gtgagccgaatctga
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