KEGG   Marasmius oreades (fairy-ring mushroom): E1B28_003370
Entry
E1B28_003370      CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K12589  exosome complex component RRP42
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    E1B28_003370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    E1B28_003370
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     E1B28_003370
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     E1B28_003370
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 66072446
NCBI-ProteinID: XP_043002303
UniProt: A0A9P7UJR6
LinkDB
Position
11:complement(1804411..1806296)
AA seq 344 aa
MALVSVSKAEKSYIQAGILASPAHRLDGRSLHDFRSIALETGVAPLANGSARLKIGRNPQ
DGSGGTEVLAAVKLEVENVEGGTGGVDGGRIVCSVSCSPSAYPNISSGALDDLQHDYTDV
INQTLSHPSLHPANLGILPRKKSWLLNLDIVVLADAGNIYDALFMSARAALWDTKVPRTR
SIEYKARKSGPSAKDKDMVGGSGDMDVDQDTVSGFDTRHTSGAIDFELPDYWDEGEILDG
RNRWPLCVSLNLIPPAHFLDATLQEEASASIRVLLMFSFASPGQPTLQGMRMLGPGELSM
ASLKALIKEGGKYANEMHSALTSKLRDEDLRRNQKAREKFVSRI
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggccttggtatcggtctcgaaagcagaaaaatcatacattcaagccggaattctcgcg
agtcctgcccatcgactggatggtcgttctttacatgactttcgctcgatagcactggaa
acaggtgtagcacccttagccaacggtagtgcgcgcctgaaaatcggtcgcaatcctcag
gatggaagtggaggcacagaagtcttagctgccgtaaagctcgaagtcgagaatgttgaa
gggggcacaggtggagtcgatggaggaaggatagtttgtagtgtttcttgttctccttcc
gcatacccaaacatttcttctggggccctcgacgatctacaacatgactacactgacgtt
atcaaccaaacactttcacatccgtctttgcatccggccaatcttggaattctccctcgg
aaaaagtcctggcttttgaaccttgacatcgtcgtcttggctgatgctggaaatatctac
gacgcgcttttcatgtctgcacgtgctgcgttatgggataccaaagttccaaggacgaga
agtattgagtacaaggcaaggaaaagtggtccgagcgctaaagacaaagacatggtggga
ggctccggtgatatggatgtggaccaggatactgtcagtggcttcgatactagacacaca
agcggggctatcgattttgaactccccgattattgggatgaaggtgagattctggatggt
cggaatagatggccattgtgtgtttccctgaatttgatacctcctgcacatttcctggat
gcaacattgcaagaagaagcttcagcatcgatacgagttcttttgatgttctcatttgct
tcacctggtcaacccactctacaaggcatgcggatgttaggacccggcgaattgtctatg
gccagtttaaaagcgctcattaaggaaggggggaaatacgctaatgaaatgcactccgct
ctcacctcgaaattaagagacgaggatttacgacgtaaccagaaagctagagagaaattt
gtgagccgaatctga

DBGET integrated database retrieval system