Marasmius oreades (fairy-ring mushroom): E1B28_004084
Help
Entry
E1B28_004084 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_004084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_004084
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
E1B28_004084
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
E1B28_004084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
66073160
NCBI-ProteinID:
XP_043013140
UniProt:
A0A9P7UXW5
LinkDB
All DBs
Position
2:1560009..1562923
Genome browser
AA seq
722 aa
AA seq
DB search
MAARKLQTEIDRTLKKVSEGVEYFEAVYEKMQASTNQTQKEKLELDLKTQIKKLQRLRDQ
IKTWLASNDIKDKSQLLENRKLIETQMEKFKACEKEMKTKAFSKEGLIAAARLDPKEQEK
EEEVSWLQTKVEELQMQVEQAEAEIESLQGTGKKRNKAGSSARLDELEHLNERRKWHISR
LEIILRLLNNGSLPPEKVADLHEDVSYFVESNTEEDFDEDEGIYDELNLDEEEEMFRGPV
HETDDSDESDAASEVDLPPRTPNKVQKHDEESLSNHKALDSPILKKATIALRKTSVDAKS
PAMTLSKPVPPHSPAPPPARPPIRYAAAAAAAIAPSTPSYSSQATHATTITTSPPASSSS
ATAAQPASIPASGSQSNLQEQLSVASSSPSLTHPSVTSPMLSSAASVSQQPDGSFYSSQE
SPAISEAVLSSIGGPAATSSPKQSRGQPAQKDPASPKAPNQSPTAQSQSMANGNHQPSQP
PPQQTALASVSAHTVNSGSAISAPTQPNAPQFPPGVKVPIGDSQGQLLAAQQQQQQQLLT
GNRPSSAAQQPIRPQQMPGSLSDLVDSFENAKQKAAVRMQNLDQVHKMLEGGYANVPQPQ
DTEKPKYYVPRHPFNTPAYYPQQTHALLSTPAIFSQLDVETLFYIFYYLSGTYQQFLAAR
ELKRQSWRFHVKYLTWFQRHSEPQAITEEYEQGVYVYFDWEGSWCQRKKSDFRFEYRYLS
ED
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaaggaaactgcaaaccgaaatcgaccgaacgttgaaaaaagtttcggaaggc
gttgagtatttcgaggccgtgtatgagaagatgcaagcctcgacaaatcagacgcagaaa
gagaaactcgaactagatctcaagactcaaatcaagaagcttcagcggctacgagaccaa
attaagacgtggttggccagtaacgacatcaaagacaagtcgcagctcctggaaaatcga
aagttgattgagacccaaatggagaaattcaaagcatgcgaaaaggaaatgaagaccaaa
gcattctcgaaggagggccttattgcagccgctagactagatccgaaagagcaagagaag
gaggaggaggtctcctggctacagacgaaggtcgaagaactacagatgcaggtggaacaa
gctgaggcggagatagagtccttacaggggactgggaagaagcggaataaggcaggctca
tcggcacgtttagacgagttagagcatctgaacgaaagacggaagtggcacatcagcagg
ctagagatcatcctccggctgctcaataacgggtcattacccccggagaaggtggcagac
ctacatgaagacgtgtcatattttgtagaaagcaacacggaagaagacttcgacgaggac
gaaggcatatatgatgaactcaatttggacgaggaggaggagatgttccgcggtcctgta
catgaaacagatgatagtgacgagtctgacgctgccagtgaggtggacctaccaccgcga
actccaaacaaggtacagaaacacgatgaagagagtctctcaaaccacaaggccctcgac
agtccgatattaaagaaggccacgatagccttgaggaaaacctcggtggatgcgaagtcg
ccggccatgaccctatcgaaacccgtccctccgcactctccagcgccgccacctgcgcga
cctccgatacgatatgctgctgccgctgccgccgctatcgctccctcgacaccttcatac
agttcccaggcaactcatgccaccacgattacaacatcgccaccggcatcttcaagttct
gcgactgcggcgcaacccgcctcgatcccagcgtcaggatctcaatcgaatctacaagaa
cagttgtccgtggcttcttcttcgcccagcttaacacacccctcagtcacaagcccgatg
ctttcatctgcggcatcagtttcccagcaaccagacggctcattttactccagccaagaa
tcaccagcaatatcggaggcagtacttagttccatcggtggacctgcagcaacatcgtct
cccaaacaatctcggggacagccggcacagaaagacccggcatcgcctaaagcacctaac
caatcccctactgctcagtctcaatcgatggcgaacgggaatcatcaaccatcgcagcca
ccaccgcaacagacggcactagcatcggtgtctgctcatactgtaaactcgggttctgcg
atttctgctcctacacaacccaatgcacctcagttcccgcccggagttaaggttcccatt
ggagactctcagggtcaattgctagcagctcaacagcaacaacagcagcagttgctcact
ggcaatcgaccatcttcggcggcacagcaaccaatacgcccacagcaaatgcctggatcg
ttatccgatcttgtcgattcgtttgagaacgccaagcagaaagcagctgtacggatgcag
aaccttgatcaggttcacaagatgttggaaggaggatatgcaaacgtgcctcaacctcaa
gatactgagaaaccgaagtactacgttccgcggcatcctttcaacacacctgcatattat
cctcaacaaactcatgcactattgagtacgccagcaatcttctcccaacttgatgtggag
acactattctacatcttctattacctatcggggacataccagcaatttttggcggcacga
gaactgaaacgacagtcctggcgatttcatgtcaaatatctcacatggttccagcgtcac
tctgaaccccaggcaataactgaggagtacgagcaaggtgtatatgtgtattttgactgg
gagggctcgtggtgtcagaggaagaagagtgatttccgattcgaatatcgatatctgtcg
gaagattga
DBGET
integrated database retrieval system
