Marasmius oreades (fairy-ring mushroom): E1B28_004101
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Entry
E1B28_004101 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12879
THO complex subunit 2
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03013
Nucleocytoplasmic transport
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_004101
09122 Translation
03013 Nucleocytoplasmic transport
E1B28_004101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_004101
03041 Spliceosome [BR:
more03041
]
E1B28_004101
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
E1B28_004101
Spliceosome [BR:
more03041
]
Complex C
Other components
EJC/TREX
E1B28_004101
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
E1B28_004101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
THOC2_N
Tho2
Thoc2
Motif
Other DBs
NCBI-GeneID:
66073177
NCBI-ProteinID:
XP_043013157
UniProt:
A0A9P8ACE4
LinkDB
All DBs
Position
2:1594572..1602546
Genome browser
AA seq
2027 aa
AA seq
DB search
MEVVNKVLGYISRWNDGGDVECRNFLVGPHSNSSDSSSIDILATAYEALLSATLTTRPPK
HSLTVETLVSFVQSVFEHLPSTSSATRSSNFSALGEQLVDIVWSLDTTLDEILVDANTSI
NRCGEQPGDKFTSLLAKSNKTKQNVEADKVKIGSVVKRLLELGILDPTCCRERLDSAILE
NVGLIPDKALSEKKEIRLRTALFYKQNKFNLLREQSEGYSKLTVELTSNLGPAHSSSTGR
PIETHDSIVERARPVWEKIISLIGYFDLDPNKVLDIILDVMSVHLATHYTFFIALLLYSP
WSHLNVDQVKIKGEDMSTDPPVGQYQGKTLDEILSLADKRPIRSYKKKGPSVLAQVLGFK
LAHYQSPEVREQPPKALYLAAAILIREGFIELEDLYPHLSPKDDDMDKVYQGYLKEVENR
IQAAKFSHLAMAAPLESSGTTSKPKAAAPAESKTPEPKDPPDQKSALVSALLSVGSLKPA
IAIMSKFPWIADAHPEIADLMIRVLTCSLEPLYDSQLVTKSRNTGFTQPRARYGTTGLVQ
PSPKKQTLTIWAPTPPSTHTTDFVFFFADWMDLIPVCTCLEDLEDVIEPLMRFIGLHISR
DPLFLTKFVRLGRKHLSTVIPIEKQPAGEVESDHPIYAFWFKVSRMYLLPALSLIRGNAV
CAVDIWNIIKLYDVTARWRLWGEWRSSTYKSHPELRIRQVQAEKESKGILRRLSHNTIDS
LSGPFAKLCHSNPCILFSNCVTQIMAYDNLAQVVISALRYITIFGFDVLVFIILDALSNP
NKERVKDDGVNTSDWLLSLASFAGMVFRRFGFDLTPYLRYITHQLQQGQTTEIVVLRELI
WKMGGIEPLPSLSDSQIQAMAGGPALRIEAIASTTRGARLEPGDANLRAPQRLGKALVDG
SLALPLLIQVAQQRQSAIFQARDAHLKSLASLYDTTHGVLLQYLELLTTPQVVSPEDYGN
KVLPPLGDLAELYGICAPICMQIIRPVLHAQLRDTALKMVEEERKANEAREKGLKEKLTA
KRETSSLSTSRVSSPALASKDNPDSDSKPDASENNEDVSMEAETKTVPESPWLPQLAVLF
DEVKRTIPPHVYDVLGPGFYVTFWQLSTYDLSPPGSKYDDEMANLRALIRQEDSRYISAD
RAADRARRQLAPAHKARRDRYTTFVDTLTKEFKEQTICRAFTLKRLAREKQHWFPFGMKK
SQRLVEVLIEHCLQPRCLLSPMDADFCAQFVKVMHTQGTPGFYTLGCYDKLLGDQVKVVL
FSCSEYEARNYGRFLLGILTDLSKWHQDEQAYIQDNRSKVGGKTILHAGFQAKYQLPMPS
EHQLKWKDFRNLLRKWHKKLANAFTESIQTREYMHVYNAIIVLKEVLPVFPLASVYQDGG
VQLDRAVDQFLETEERGDLKILGRAYSASLKKRENLWTASKPVAKSSTPAAPSPKPVQST
GIPEKPRAAPPTGPSAQSSSSNDNKRPTGTLQPSVSAPSAPRAQLANPGKATQPPADHPT
TNGTSVAGKSGMESVPRPPVVKRVRPEVSRPDSPQVPNGAFEPNKFASEQDDTENTGTGG
QPPHSPRGPRWNEEKPPTEPLAVMPPPFAPSQTLSAHELRETAKQSISRPEKTAEERTPR
PNNEPHSQTGSAAHSPRIRSSSPPTRPGTRNHSSESRTSGGRSRNERAEGEEKRTSDQSR
GDSSRDHTGLIRRDSVTHSRSERRERGDGEREKDRESRRDRHGDRDRDRDRDRDRDRDRE
RDRHGDRHRRDDKDRDRESRKERESARNQNSGSTAPSEDRSVLQRPDNSRHRNGAEENLG
KRRRGPDDEFERGSKRSSRKERDERRRLGDKESHEKLRESERPDRRRRERDTESEPRGLT
GDKPSEKRSAESAQTMPSTPSSTKTLPSTTPSAPRAMSSNDVHKKSESGPGRSQRDHGPS
SGSNAVPVEGSPGASLRSRIGDKPDTSSRPPVSSGPWKDDREGRKRTFGDREKDAGEGQG
DQGVPKRPRIIRNRYQSAPGEASIARRALGFDPQPSEKSSEKGRRRD
NT seq
6084 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggttaataaagttctgggttacatttctcggtggaacgatggtggagacgtt
gaatgtcgcaattttcttgtcggacctcactctaattcctctgattcctcctcaatcgac
atcttggccactgcctacgaagcccttttgtcggctactctaacaacacgccccccgaaa
cattctttaaccgtcgagactcttgtttctttcgtccagtcggtttttgaacaccttcct
tccacctcctccgccactcggtcttccaatttttcagcactcggcgaacaattggttgat
atagtatggtcgctcgacaccacacttgacgagatacttgttgacgcaaacacctcaatc
aatcgttgtggcgagcagcctggagacaaattcacctcccttcttgcaaagtcaaacaaa
actaagcagaatgtagaagcagacaaggttaagataggtagtgtcgtcaaaagattactg
gaactgggtatcctcgacccaacttgttgccgagagcgactagattctgctatactggag
aatgttgggcttattccggacaaggctctcagtgagaagaaagagatcagactaaggacc
gcgttattctacaagcagaataagttcaaccttctgcgcgaacaatccgaagggtacagc
aagttgaccgtcgaactcaccagcaatttgggtcccgctcactcttccagtaccggccga
cctattgagactcatgattcgatcgttgagagggctcgtcccgtctgggagaaaatcatc
agtctcattggttatttcgacttggacccaaacaaagtcctcgatatcatcctcgacgtc
atgtccgtccatctagccacacattatactttcttcattgcacttctcttgtactctccc
tggtcccatctaaatgtggatcaggtcaaaatcaagggcgaggatatgtcaacagatcca
cctgttggacagtatcaaggcaagacgttggacgagatattgtcgttggcggataaacgg
ccgatacggtcatacaaaaagaagggccctagcgtattggcgcaggtacttggattcaag
ctcgcgcactatcagtcccccgaagtccgggaacaacctccgaaggcactatatctcgct
gctgcaatattgatacgagaggggtttattgagttggaggacttgtatccgcatctctca
ccaaaagacgatgacatggacaaagtttatcaaggctatttgaaagaggtcgagaataga
atccaggcagccaagttcagtcacttggctatggccgctccccttgaatccagtggaacc
acctcgaaacccaaggcggcggcaccagcagaatccaaaacgccagaacccaaagatcca
ccggaccagaaatcagccttagtttccgccctcttgtcggtcggctccctcaaaccagcc
attgcaatcatgtctaaatttccgtggattgccgacgctcatccggaaattgcagacctt
atgattagagtgttgacatgttctctagagccgttatacgattctcagttggtcacgaaa
agtcgaaatacagggttcactcaaccgcgcgctagatatggcacgactggcttggttcag
ccaagccccaagaagcagacgttgactatctgggctccaactcctcctagtacccacaca
acagattttgttttcttttttgcagattggatggatctgattccagtgtgcacctgtctg
gaggatctcgaagatgttattgaacctttgatgcgatttataggcctgcatatctcccgc
gatcccttattccttaccaaatttgtcagacttggtcgcaaacatctttccactgttatc
cctatcgaaaaacagccagcaggagaagtcgagtcagaccacccaatatacgccttctgg
ttcaaggtttcgaggatgtatctcctccccgcgctgtctctcatcagaggcaacgctgtt
tgtgcggtcgatatttggaacattatcaaattgtatgatgttacagcaagatggaggttg
tggggtgaatggagatcgtcgacttacaagtcgcaccccgaacttcgaattcgccaggtt
caagccgagaaagaatcgaaaggaatcttgcgacgtctttcacataataccatcgattct
ctctctggcccgttcgccaaattatgccattccaatccctgcatcctattcagcaactgt
gttactcaaatcatggcatatgataacttggcacaagtggtgatatcagcactccgatac
atcactatttttggctttgacgttctggtgtttattatcttggacgctctttctaatcct
aacaaagaacgggtgaaggatgatggtgtcaacacgtcggattggctgctcagccttgcc
tcattcgcaggaatggtgttcaggcgattcggattcgatttgacaccttacctgcggtat
atcactcaccaacttcagcaaggccaaacaaccgaaatagtcgtgttgagggaacttata
tggaagatgggtggaatcgaacctctaccaagtctctcggactcgcaaatacaggcaatg
gcaggtggtcctgcattgcggatcgaagcgatcgcttcgactacacgtggagcccggttg
gaaccgggtgacgctaatcttagagccccccaacgacttggcaaggcgttggttgacgga
tctctagcacttcctctcctcatacaagttgcacaacaaaggcagtcagctatttttcaa
gcacgtgatgcacatctcaaatcactggcaagcttgtatgatacaacacatggcgtcctt
ctccaatatctggaacttcttactacgcctcaggttgtttcgcctgaggattatgggaac
aaggtactcccaccattgggagatttggccgagttgtacggtatctgtgctccaatatgt
atgcaaatcatacgtcctgttctgcatgctcaattgcgggacactgcgttgaagatggtt
gaagaagaacgcaaagcaaatgaagcgcgcgagaagggtctgaaggagaagttgactgcc
aaacgggagacgagctctctatcaacatcgagagtatcgtctccagccctggcaagcaaa
gataatcctgactctgactccaaaccagacgcatccgagaataacgaagatgtgtcgatg
gaggcagaaacgaaaaccgttccggagagcccatggttgcctcaactagccgtattgttc
gatgaagtcaagaggactataccgcctcacgtatacgacgtcttaggccccggattctac
gtcactttttggcaactctcgacctacgacttgtcacctcctgggtccaagtatgatgac
gagatggctaatctccgggctcttatccgacaagaggattcaaggtacatatctgcggac
cgtgctgcagatcgtgcgagacggcaattagccccagctcataaagctcgccgtgatcgt
tatacgacatttgtagacactctcaccaaagagttcaaggagcagactatttgtcgtgct
tttaccctgaagcgccttgcgcgagaaaaacaacactggtttccgttcggcatgaagaaa
tctcaaagactcgtggaagttctaatcgagcattgtttacaaccgagatgtctcctatcg
cccatggatgccgacttttgtgcacagtttgtgaaagtgatgcacacacaaggaacacct
gggttctatactctcggttgctatgataagcttcttggggaccaggttaaggttgttctg
ttctcctgtagtgaatatgaggctcgaaactatggtcgatttttactggggatactgacc
gacttgtcaaaatggcatcaggatgaacaggcgtacattcaagataataggtcgaaagtc
ggaggaaagacaattttacatgctggctttcaagctaaataccaacttccaatgccttcg
gaacatcagttgaagtggaaggatttccgtaacctccttcggaaatggcataaaaagttg
gcgaacgccttcacggaaagcattcagacacgcgaatacatgcatgtgtataacgcaatc
attgtcttgaaagaggtccttcctgtgttccctcttgcgtctgtttaccaggatggcggt
gtacaattggatcgtgctgtggatcaattcctcgaaacagaggaacgcggggacctcaaa
attcttggcagagcttattctgcaagcttgaagaagcgagaaaatctgtggacagcgtcc
aaaccggttgcgaagtcaagtacacctgccgccccgtccccaaaaccggtgcaatccact
ggcatcccggagaaaccgcgggcagcacctcctacaggacccagtgcccaaagttcctcc
agtaatgataataaacgccctaccggtacactacaaccaagcgtatcggctccttctgca
ccgcgggctcaactcgccaaccccggcaaagctacccaacctcccgctgatcatccgacc
acaaatggaaccagcgtcgccgggaaatccgggatggaaagtgttcctcgccctcctgtc
gttaaacgtgttcgccccgaggtgtcaagaccggattcacctcaagtaccgaatggtgcc
tttgagcccaataaattcgcctctgaacaggatgatacagagaacactggtacgggcggt
caaccgcctcattcaccacgtggccctaggtggaacgaggaaaaaccaccaactgaacct
cttgctgtcatgcctcctccctttgctccaagtcagaccctttcagcccacgaactacgg
gagacggccaagcaaagtataagtcgcccggagaaaaccgctgaggagaggacgcctcgc
ccaaacaacgaacctcacagtcaaactggttctgcagcacactcgcctcgtattcggtcg
tcgtctcctcctacacgacctggtacaaggaatcacagttctgaaagtcggaccagtggc
ggaagaagtcgcaacgagcgtgctgaaggggaagagaaacgaacatcggatcagtcgcgg
ggtgactcttctagagaccacactggactgatacgacgtgatagcgttacgcactctcgt
agcgagcgtagagaaagaggtgacggtgaacgcgaaaaggaccgagaaagccgtcgtgat
aggcacggcgacagagatcgtgacagggaccgtgaccgcgatagagaccgggaccgcgaa
cgcgatagacatggtgatcgtcatcgtcgagacgacaaagatcgtgatagggaaagtcgg
aaggagcgagagagcgcaaggaaccaaaatagtggatccacagcaccgagtgaagaccga
tctgtacttcaacgtcccgataactcgaggcataggaatggcgcggaggaaaatcttggg
aaacgaaggagagggcccgatgacgagtttgaacgaggatccaaacgaagttctcgtaaa
gaacgagatgaacgtaggcgtcttggagacaaagagagtcatgaaaaactacgtgaatca
gaaaggccggaccgacgaaggagagagagggacacggagtcagagcctcgtggtttaact
ggagataagcccagcgaaaagcgctctgccgagagtgcacaaacaatgccatccacacct
tcgtccacgaagacccttccgtccaccacaccttcggctcctcgagcaatgtcttctaat
gatgtacataaaaagagtgaatcaggcccaggacgtagccagcgtgatcatggacccagc
tcaggttcaaatgctgttcccgtcgaaggatcccctggtgcgagtcttcgttctcgcata
ggggacaagccggacacatcatcgcgccctcctgtatcttctggaccctggaaagacgac
cgtgaaggtcgcaaaaggacgttcggtgatcgcgaaaaagacgccggtgaaggccaaggt
gatcagggcgttcctaaacgtcctcgcatcattcgaaatcgatatcagtcggccccgggc
gaagcgagtattgcacggagagcactgggtttcgacccacaaccatcagaaaagtcgtcc
gagaagggtcgaagaagagattaa
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