KEGG   Marasmius oreades (fairy-ring mushroom): E1B28_004101
Entry
E1B28_004101      CDS       T08156                                 
Name
(RefSeq) uncharacterized protein
  KO
K12879  THO complex subunit 2
Organism
more  Marasmius oreades (fairy-ring mushroom)
Pathway
more03013  Nucleocytoplasmic transport
more03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:more00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    E1B28_004101
  09122 Translation
   03013 Nucleocytoplasmic transport
    E1B28_004101
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:more03019]
    E1B28_004101
   03041 Spliceosome [BR:more03041]
    E1B28_004101
Messenger RNA biogenesis [BR:more03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     E1B28_004101
Spliceosome [BR:more03041]
 Complex C
  Other components
   EJC/TREX
    E1B28_004101
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    E1B28_004101
SSDB
Motif
Pfam: THOC2_N Tho2 Thoc2
Other DBs
NCBI-GeneID: 66073177
NCBI-ProteinID: XP_043013157
UniProt: A0A9P8ACE4
LinkDB
Position
2:1594572..1602546
AA seq 2027 aa
MEVVNKVLGYISRWNDGGDVECRNFLVGPHSNSSDSSSIDILATAYEALLSATLTTRPPK
HSLTVETLVSFVQSVFEHLPSTSSATRSSNFSALGEQLVDIVWSLDTTLDEILVDANTSI
NRCGEQPGDKFTSLLAKSNKTKQNVEADKVKIGSVVKRLLELGILDPTCCRERLDSAILE
NVGLIPDKALSEKKEIRLRTALFYKQNKFNLLREQSEGYSKLTVELTSNLGPAHSSSTGR
PIETHDSIVERARPVWEKIISLIGYFDLDPNKVLDIILDVMSVHLATHYTFFIALLLYSP
WSHLNVDQVKIKGEDMSTDPPVGQYQGKTLDEILSLADKRPIRSYKKKGPSVLAQVLGFK
LAHYQSPEVREQPPKALYLAAAILIREGFIELEDLYPHLSPKDDDMDKVYQGYLKEVENR
IQAAKFSHLAMAAPLESSGTTSKPKAAAPAESKTPEPKDPPDQKSALVSALLSVGSLKPA
IAIMSKFPWIADAHPEIADLMIRVLTCSLEPLYDSQLVTKSRNTGFTQPRARYGTTGLVQ
PSPKKQTLTIWAPTPPSTHTTDFVFFFADWMDLIPVCTCLEDLEDVIEPLMRFIGLHISR
DPLFLTKFVRLGRKHLSTVIPIEKQPAGEVESDHPIYAFWFKVSRMYLLPALSLIRGNAV
CAVDIWNIIKLYDVTARWRLWGEWRSSTYKSHPELRIRQVQAEKESKGILRRLSHNTIDS
LSGPFAKLCHSNPCILFSNCVTQIMAYDNLAQVVISALRYITIFGFDVLVFIILDALSNP
NKERVKDDGVNTSDWLLSLASFAGMVFRRFGFDLTPYLRYITHQLQQGQTTEIVVLRELI
WKMGGIEPLPSLSDSQIQAMAGGPALRIEAIASTTRGARLEPGDANLRAPQRLGKALVDG
SLALPLLIQVAQQRQSAIFQARDAHLKSLASLYDTTHGVLLQYLELLTTPQVVSPEDYGN
KVLPPLGDLAELYGICAPICMQIIRPVLHAQLRDTALKMVEEERKANEAREKGLKEKLTA
KRETSSLSTSRVSSPALASKDNPDSDSKPDASENNEDVSMEAETKTVPESPWLPQLAVLF
DEVKRTIPPHVYDVLGPGFYVTFWQLSTYDLSPPGSKYDDEMANLRALIRQEDSRYISAD
RAADRARRQLAPAHKARRDRYTTFVDTLTKEFKEQTICRAFTLKRLAREKQHWFPFGMKK
SQRLVEVLIEHCLQPRCLLSPMDADFCAQFVKVMHTQGTPGFYTLGCYDKLLGDQVKVVL
FSCSEYEARNYGRFLLGILTDLSKWHQDEQAYIQDNRSKVGGKTILHAGFQAKYQLPMPS
EHQLKWKDFRNLLRKWHKKLANAFTESIQTREYMHVYNAIIVLKEVLPVFPLASVYQDGG
VQLDRAVDQFLETEERGDLKILGRAYSASLKKRENLWTASKPVAKSSTPAAPSPKPVQST
GIPEKPRAAPPTGPSAQSSSSNDNKRPTGTLQPSVSAPSAPRAQLANPGKATQPPADHPT
TNGTSVAGKSGMESVPRPPVVKRVRPEVSRPDSPQVPNGAFEPNKFASEQDDTENTGTGG
QPPHSPRGPRWNEEKPPTEPLAVMPPPFAPSQTLSAHELRETAKQSISRPEKTAEERTPR
PNNEPHSQTGSAAHSPRIRSSSPPTRPGTRNHSSESRTSGGRSRNERAEGEEKRTSDQSR
GDSSRDHTGLIRRDSVTHSRSERRERGDGEREKDRESRRDRHGDRDRDRDRDRDRDRDRE
RDRHGDRHRRDDKDRDRESRKERESARNQNSGSTAPSEDRSVLQRPDNSRHRNGAEENLG
KRRRGPDDEFERGSKRSSRKERDERRRLGDKESHEKLRESERPDRRRRERDTESEPRGLT
GDKPSEKRSAESAQTMPSTPSSTKTLPSTTPSAPRAMSSNDVHKKSESGPGRSQRDHGPS
SGSNAVPVEGSPGASLRSRIGDKPDTSSRPPVSSGPWKDDREGRKRTFGDREKDAGEGQG
DQGVPKRPRIIRNRYQSAPGEASIARRALGFDPQPSEKSSEKGRRRD
NT seq 6084 nt   +upstreamnt  +downstreamnt
atggaagtggttaataaagttctgggttacatttctcggtggaacgatggtggagacgtt
gaatgtcgcaattttcttgtcggacctcactctaattcctctgattcctcctcaatcgac
atcttggccactgcctacgaagcccttttgtcggctactctaacaacacgccccccgaaa
cattctttaaccgtcgagactcttgtttctttcgtccagtcggtttttgaacaccttcct
tccacctcctccgccactcggtcttccaatttttcagcactcggcgaacaattggttgat
atagtatggtcgctcgacaccacacttgacgagatacttgttgacgcaaacacctcaatc
aatcgttgtggcgagcagcctggagacaaattcacctcccttcttgcaaagtcaaacaaa
actaagcagaatgtagaagcagacaaggttaagataggtagtgtcgtcaaaagattactg
gaactgggtatcctcgacccaacttgttgccgagagcgactagattctgctatactggag
aatgttgggcttattccggacaaggctctcagtgagaagaaagagatcagactaaggacc
gcgttattctacaagcagaataagttcaaccttctgcgcgaacaatccgaagggtacagc
aagttgaccgtcgaactcaccagcaatttgggtcccgctcactcttccagtaccggccga
cctattgagactcatgattcgatcgttgagagggctcgtcccgtctgggagaaaatcatc
agtctcattggttatttcgacttggacccaaacaaagtcctcgatatcatcctcgacgtc
atgtccgtccatctagccacacattatactttcttcattgcacttctcttgtactctccc
tggtcccatctaaatgtggatcaggtcaaaatcaagggcgaggatatgtcaacagatcca
cctgttggacagtatcaaggcaagacgttggacgagatattgtcgttggcggataaacgg
ccgatacggtcatacaaaaagaagggccctagcgtattggcgcaggtacttggattcaag
ctcgcgcactatcagtcccccgaagtccgggaacaacctccgaaggcactatatctcgct
gctgcaatattgatacgagaggggtttattgagttggaggacttgtatccgcatctctca
ccaaaagacgatgacatggacaaagtttatcaaggctatttgaaagaggtcgagaataga
atccaggcagccaagttcagtcacttggctatggccgctccccttgaatccagtggaacc
acctcgaaacccaaggcggcggcaccagcagaatccaaaacgccagaacccaaagatcca
ccggaccagaaatcagccttagtttccgccctcttgtcggtcggctccctcaaaccagcc
attgcaatcatgtctaaatttccgtggattgccgacgctcatccggaaattgcagacctt
atgattagagtgttgacatgttctctagagccgttatacgattctcagttggtcacgaaa
agtcgaaatacagggttcactcaaccgcgcgctagatatggcacgactggcttggttcag
ccaagccccaagaagcagacgttgactatctgggctccaactcctcctagtacccacaca
acagattttgttttcttttttgcagattggatggatctgattccagtgtgcacctgtctg
gaggatctcgaagatgttattgaacctttgatgcgatttataggcctgcatatctcccgc
gatcccttattccttaccaaatttgtcagacttggtcgcaaacatctttccactgttatc
cctatcgaaaaacagccagcaggagaagtcgagtcagaccacccaatatacgccttctgg
ttcaaggtttcgaggatgtatctcctccccgcgctgtctctcatcagaggcaacgctgtt
tgtgcggtcgatatttggaacattatcaaattgtatgatgttacagcaagatggaggttg
tggggtgaatggagatcgtcgacttacaagtcgcaccccgaacttcgaattcgccaggtt
caagccgagaaagaatcgaaaggaatcttgcgacgtctttcacataataccatcgattct
ctctctggcccgttcgccaaattatgccattccaatccctgcatcctattcagcaactgt
gttactcaaatcatggcatatgataacttggcacaagtggtgatatcagcactccgatac
atcactatttttggctttgacgttctggtgtttattatcttggacgctctttctaatcct
aacaaagaacgggtgaaggatgatggtgtcaacacgtcggattggctgctcagccttgcc
tcattcgcaggaatggtgttcaggcgattcggattcgatttgacaccttacctgcggtat
atcactcaccaacttcagcaaggccaaacaaccgaaatagtcgtgttgagggaacttata
tggaagatgggtggaatcgaacctctaccaagtctctcggactcgcaaatacaggcaatg
gcaggtggtcctgcattgcggatcgaagcgatcgcttcgactacacgtggagcccggttg
gaaccgggtgacgctaatcttagagccccccaacgacttggcaaggcgttggttgacgga
tctctagcacttcctctcctcatacaagttgcacaacaaaggcagtcagctatttttcaa
gcacgtgatgcacatctcaaatcactggcaagcttgtatgatacaacacatggcgtcctt
ctccaatatctggaacttcttactacgcctcaggttgtttcgcctgaggattatgggaac
aaggtactcccaccattgggagatttggccgagttgtacggtatctgtgctccaatatgt
atgcaaatcatacgtcctgttctgcatgctcaattgcgggacactgcgttgaagatggtt
gaagaagaacgcaaagcaaatgaagcgcgcgagaagggtctgaaggagaagttgactgcc
aaacgggagacgagctctctatcaacatcgagagtatcgtctccagccctggcaagcaaa
gataatcctgactctgactccaaaccagacgcatccgagaataacgaagatgtgtcgatg
gaggcagaaacgaaaaccgttccggagagcccatggttgcctcaactagccgtattgttc
gatgaagtcaagaggactataccgcctcacgtatacgacgtcttaggccccggattctac
gtcactttttggcaactctcgacctacgacttgtcacctcctgggtccaagtatgatgac
gagatggctaatctccgggctcttatccgacaagaggattcaaggtacatatctgcggac
cgtgctgcagatcgtgcgagacggcaattagccccagctcataaagctcgccgtgatcgt
tatacgacatttgtagacactctcaccaaagagttcaaggagcagactatttgtcgtgct
tttaccctgaagcgccttgcgcgagaaaaacaacactggtttccgttcggcatgaagaaa
tctcaaagactcgtggaagttctaatcgagcattgtttacaaccgagatgtctcctatcg
cccatggatgccgacttttgtgcacagtttgtgaaagtgatgcacacacaaggaacacct
gggttctatactctcggttgctatgataagcttcttggggaccaggttaaggttgttctg
ttctcctgtagtgaatatgaggctcgaaactatggtcgatttttactggggatactgacc
gacttgtcaaaatggcatcaggatgaacaggcgtacattcaagataataggtcgaaagtc
ggaggaaagacaattttacatgctggctttcaagctaaataccaacttccaatgccttcg
gaacatcagttgaagtggaaggatttccgtaacctccttcggaaatggcataaaaagttg
gcgaacgccttcacggaaagcattcagacacgcgaatacatgcatgtgtataacgcaatc
attgtcttgaaagaggtccttcctgtgttccctcttgcgtctgtttaccaggatggcggt
gtacaattggatcgtgctgtggatcaattcctcgaaacagaggaacgcggggacctcaaa
attcttggcagagcttattctgcaagcttgaagaagcgagaaaatctgtggacagcgtcc
aaaccggttgcgaagtcaagtacacctgccgccccgtccccaaaaccggtgcaatccact
ggcatcccggagaaaccgcgggcagcacctcctacaggacccagtgcccaaagttcctcc
agtaatgataataaacgccctaccggtacactacaaccaagcgtatcggctccttctgca
ccgcgggctcaactcgccaaccccggcaaagctacccaacctcccgctgatcatccgacc
acaaatggaaccagcgtcgccgggaaatccgggatggaaagtgttcctcgccctcctgtc
gttaaacgtgttcgccccgaggtgtcaagaccggattcacctcaagtaccgaatggtgcc
tttgagcccaataaattcgcctctgaacaggatgatacagagaacactggtacgggcggt
caaccgcctcattcaccacgtggccctaggtggaacgaggaaaaaccaccaactgaacct
cttgctgtcatgcctcctccctttgctccaagtcagaccctttcagcccacgaactacgg
gagacggccaagcaaagtataagtcgcccggagaaaaccgctgaggagaggacgcctcgc
ccaaacaacgaacctcacagtcaaactggttctgcagcacactcgcctcgtattcggtcg
tcgtctcctcctacacgacctggtacaaggaatcacagttctgaaagtcggaccagtggc
ggaagaagtcgcaacgagcgtgctgaaggggaagagaaacgaacatcggatcagtcgcgg
ggtgactcttctagagaccacactggactgatacgacgtgatagcgttacgcactctcgt
agcgagcgtagagaaagaggtgacggtgaacgcgaaaaggaccgagaaagccgtcgtgat
aggcacggcgacagagatcgtgacagggaccgtgaccgcgatagagaccgggaccgcgaa
cgcgatagacatggtgatcgtcatcgtcgagacgacaaagatcgtgatagggaaagtcgg
aaggagcgagagagcgcaaggaaccaaaatagtggatccacagcaccgagtgaagaccga
tctgtacttcaacgtcccgataactcgaggcataggaatggcgcggaggaaaatcttggg
aaacgaaggagagggcccgatgacgagtttgaacgaggatccaaacgaagttctcgtaaa
gaacgagatgaacgtaggcgtcttggagacaaagagagtcatgaaaaactacgtgaatca
gaaaggccggaccgacgaaggagagagagggacacggagtcagagcctcgtggtttaact
ggagataagcccagcgaaaagcgctctgccgagagtgcacaaacaatgccatccacacct
tcgtccacgaagacccttccgtccaccacaccttcggctcctcgagcaatgtcttctaat
gatgtacataaaaagagtgaatcaggcccaggacgtagccagcgtgatcatggacccagc
tcaggttcaaatgctgttcccgtcgaaggatcccctggtgcgagtcttcgttctcgcata
ggggacaagccggacacatcatcgcgccctcctgtatcttctggaccctggaaagacgac
cgtgaaggtcgcaaaaggacgttcggtgatcgcgaaaaagacgccggtgaaggccaaggt
gatcagggcgttcctaaacgtcctcgcatcattcgaaatcgatatcagtcggccccgggc
gaagcgagtattgcacggagagcactgggtttcgacccacaaccatcagaaaagtcgtcc
gagaagggtcgaagaagagattaa

DBGET integrated database retrieval system