Marasmius oreades (fairy-ring mushroom): E1B28_004243
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Entry
E1B28_004243 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Brite
KEGG Orthology (KO) [BR:
more00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
more03016
]
E1B28_004243
Enzymes [BR:
more01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
E1B28_004243
Transfer RNA biogenesis [BR:
more03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
E1B28_004243
Prokaryotic type
E1B28_004243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-GeneID:
66073319
NCBI-ProteinID:
XP_043013304
UniProt:
A0A9P7UY44
LinkDB
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Position
2:1919898..1922941
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AA seq
852 aa
AA seq
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MSSSVREREHDEEQIDRDTKRQKLESALGTTTAEVTVTEESVLNEHPVDSSDVHVLPPSH
ALLGTPLPKAESGRPLNFLETDVGISEYVGRSVSKIEGIIKQRFTDFLVFEVDLDGNVIH
LKSLAKPDSSKKHNNGEEEEQGEPSGPSSGRQDLGEPMQGVETAENDENPITPGSKLAEE
VKVESSTTLDDLTNPWPDSFNTKLAPFLSGSGIAQLKEIYLQGPEPPRVSDSGWGGRGAK
GEEASGSVAPSETPESTATTVKSGRGGRGGRDRGGRGGKRGGPGREDHRKVVSEPFDSKD
QRTAFHKVIRELFKGKLETETDTSGSTPEDGSRIVIKWGRRGGRGDRRDGRGQSGDQASR
GTYPPYVHFTLQKTNRDTQDALSHLSRILHVNVKDLAVAGTKDKRGVTVQRVSLKRGNKT
VEDVWRLGNQVSARKSTSDALKQRGERGVRLADLVYRKAGLELGLLKGNAFVITLRNVQV
DAMDTLDKALNIVKTNGFINYYGMQRFGTASVPTHAIGLALLKGDWHKAVSLILQTRYGE
HPEVEAARNAWLKEKNIDKALSLMPRRVVAERCILESYKKQSGDTRNAMGALSTIPRNLR
LMYVHAYQSYVWNAIVSERVRMYGTEKPVVGDLVFDVVPETSAEREDDEMDTNEPDEPVS
NRQRKKQNRKPWTPPRIKTLTEEDFGNYTIFDVIMPLPGTDVAYPGGKLGERYREFLVMD
GLDPDNFVRKQKDYTLGGSYRKVLHLPNEMSWSVLRYTDPDVPLAQADEDKLLGFDPPLV
SEDGKFMALQINLQLGTASYATMALREITKTETSSHYQTNLTIAAEDQKYRGVGCDGQDE
DVEEPVHVSEES
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcctctgttcgagaacgtgagcacgacgaagaacaaatagatcgcgacactaag
cgccaaaagctcgagtctgccctgggaaccacgactgctgaggtgaccgtgactgaagag
agtgttctcaatgaacaccccgtcgattcttcagacgttcatgtacttccaccaagccat
gcgttgctaggaactcccctacccaaagctgaatccggtcgtcctctcaatttcttagaa
acagacgttgggatctcagagtatgttggacggagtgtgtcgaagattgaagggattatc
aagcagaggttcacggactttttggtattcgaagtcgatctcgatggcaatgtcatacat
ctaaaatcattggcaaaaccggattcttcaaagaagcacaataatggggaggaagaggaa
caaggagaaccttcaggtccttcttccggtcgacaggatctcggtgaaccaatgcagggt
gttgaaacagccgaaaacgacgagaatccgattaccccgggtagcaaacttgctgaagag
gtaaaagtagaatcgtccaccactctcgacgatttgacaaacccttggccggattccttc
aatacaaaacttgccccatttctatctgggagtggaatagcccagctcaaggaaatatac
cttcaaggtccagagcctccgagagttagtgatagcggctggggaggacgtggagcgaag
ggtgaggaagcctctgggtctgtggcaccctcagaaaccccagaatctactgcaactaca
gtaaaatcggggcgaggaggtcgtggtggtcgtgatcgtggaggtcgaggcggtaaacga
ggtggtcctggaagagaggaccatagaaaagtggtttcagaaccattcgactcaaaggac
caaaggaccgccttccataaagtcatacgtgaactgttcaaaggaaagctggaaaccgaa
acagacacctctggatctacacctgaagatggttctaggattgtcatcaaatggggtcgt
cgtggtggccgcggggacaggagggatggcaggggtcagtccggggatcaagcaagtcgc
gggacctatcctccatatgttcacttcacgcttcagaaaaccaatcgcgacacgcaagac
gccctctcccatctttctcgtatccttcacgtcaacgtcaaagaccttgctgttgcagga
acaaaagataaacgtggcgtaactgtccagcgcgtctcacttaagcgaggtaacaagacg
gtcgaagatgtgtggcgccttgggaatcaggtttcagcaaggaagtctactagtgatgca
ctcaagcagagaggcgagaggggtgtcagacttgcagatttggtgtaccggaaagctggc
cttgaactcggcttgttgaaggggaatgcctttgttattactcttaggaatgtccaagta
gatgctatggacaccctagacaaggccttgaatattgtgaagaccaacgggttcattaat
tattatggtatgcagagattcggcactgcatcggttccaacgcatgcaatcggacttgca
ttgctgaagggagactggcataaagccgtttcactcattctacaaacccgttatggagaa
catccggaggtagaagctgcacgtaacgcgtggttgaaagagaagaatatcgacaaagcg
ctttctttaatgccacgacgcgtcgttgcggaaagatgcattctagagagttacaagaag
caaagtggggacacccgtaatgctatgggagctctctcaacgatcccccgtaaccttcgg
ttgatgtatgtacatgcctaccagtcctatgtctggaatgctatcgtttccgagcgtgtt
cgcatgtatggcacagagaagcccgtagtgggtgaccttgttttcgatgtcgtaccggaa
actagtgcggagagagaggatgatgaaatggataccaacgagccggatgagccagtttct
aaccggcaaaggaagaagcagaacaggaaaccttggaccccgccccgtatcaagaccctc
acggaggaagactttggaaactacaccattttcgatgtgatcatgccacttcccgggacc
gatgttgcttatccgggcgggaagcttggggaacggtatagggaatttttagtgatggac
gggctggatccagataactttgttcggaagcagaaggactacacgttaggaggatcctac
cggaaggtcctgcatctgccaaacgaaatgagctggtcagtactgaggtacaccgaccca
gatgttcctttggcgcaagcagacgaggataaactgttgggttttgacccgccattagta
tcggaggacgggaaattcatggctcttcagatcaacctccaactaggaactgcttcgtat
gccacgatggctttaagggaaatcactaaaacggagactagctcgcactaccagacgaac
ctgacgattgccgctgaagatcagaaatatagaggtgttgggtgcgatgggcaggacgaa
gatgtggaagagcctgtacatgtatctgaagagagctaa
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