Marasmius oreades (fairy-ring mushroom): E1B28_004316
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Entry
E1B28_004316 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Brite
KEGG Orthology (KO) [BR:
more00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
more03009
]
E1B28_004316
Enzymes [BR:
more01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E1B28_004316
Ribosome biogenesis [BR:
more03009
]
Eukaryotic type
Pre-60S particles
Helicases
E1B28_004316
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
CTE_SPB4
Helicase_C
CTT_SPB4
ResIII
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-GeneID:
66073392
NCBI-ProteinID:
XP_043013381
UniProt:
A0A9P8ACJ1
LinkDB
All DBs
Position
2:complement(2073760..2076113)
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AA seq
644 aa
AA seq
DB search
MQTAFAGPWGSLPAPLTPWILDVIDSMGHTKMTPVQASTIPLFMKHKDVVVEAVTGSGKT
LAFVIPVLERLIARTRLRKNEIGALIISPTRELATQIHSVFSAFLSAQPSYSDGNSLPPP
LLLVSSQQSSPEQDMKRFLDTGADVVIGTPGRIEEFLLGRGRTTVNVKELEVLVLDEADR
LLDLGFQNTLTRILTHLPKQRRTGLFSATMTDVDAISELVRVGLRNPARIVVKVQSRREG
VKETVEERRIPANLQNFYITCRASEKTIQLARLILHEASHFQSSQFIVFFATGACVDHFY
HILPPFLSSNATLHSLHGHLTPSARSRTLEAFSSAITTPSTPAILLCTDIAARGLDLPHV
DTVIQYDPPSDAKAFSHRCGRTARAGRSGRAYTMLIGREEEYVDLMSVRRIPLKRHSYIG
KGGLLLDENRPEDEDVSLYLRRCRKVLLADRALHDQAVKAFVSFVRAYSKHEASYIFRVK
DLDLVGLAKSYGLLRLPKMPELKDIDPKEWEDADVDWKEYAYADKLQETKRMVTLSKFSE
EQQRARKQRAEKAANKKANTAWSGKMDQKEEREKRKEKKANKKKWSKEQESTRQMDQALK
RPRGELEDAGDDDWEDIAREERMAKKVRKGEISQKAFESEFTNL
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgcagactgcatttgcgggaccatggggctcgctcccagcacccttgacgccttggatt
ctcgatgtgatagactccatgggacacacaaaaatgacaccggttcaagcatcgacgatc
ccactcttcatgaagcataaagacgtcgtagtggaggcggtcacaggctcaggaaaaaca
ttggcatttgtgatcccagtactggagagactcattgctcggaccagattgcgaaaaaat
gaaatcggtgcactcataatcagtcccacacgagaacttgcgacacaaatacattccgtc
ttttcggcctttctatccgctcagccctcctattccgacggcaattcacttccaccaccg
ctattgttggtttcttcacaacagtcgtctccagagcaagacatgaagcgatttttggac
acgggagccgacgttgttatcggaacgccaggacgtatcgaagagtttttactcggaaga
ggtcgaacgacagtgaatgttaaagagttggaggtcctggttctggacgaagccgataga
ttacttgacttgggatttcagaacacgcttactcgaatcctcacccacctgcccaagcaa
agacgaacgggacttttcagcgctactatgaccgatgtggacgctatctccgaactagtc
cgcgtaggactacgaaaccccgctcgtattgttgtcaaggtccaatcccgtagagaaggc
gtcaaagagactgttgaagaacgacgaataccggcgaatttgcagaatttctatatcact
tgtcgtgcttcggagaaaacgatacaactggctcgcctgatcctacacgaggcatcgcat
ttccagtcgtcccaattcatcgtattctttgcaaccggagcttgcgtcgatcatttctat
cacatactgcccccttttctatcatccaatgcaacattgcattcccttcacggtcatctc
acaccctcggcacgatcgcgaacactcgaagcattctcctctgcaataacaaccccttct
actcctgcaattttattgtgcacagatattgccgctcgcggacttgatcttcctcacgtc
gataccgtgattcagtatgaccctccctctgatgccaaggcattctcacacagatgtggg
cggactgctcgagcaggtcgcagtggaagagcctatacgatgttgatcgggagagaggag
gaatacgtcgatttgatgtcggttcgccgcataccgttgaaaagacattcgtatattggg
aaggggggactgttgttggatgaaaatcgacccgaggacgaggacgtttctttatacctc
agaagatgtcgcaaagttcttctagcggatcgcgcattacatgaccaggcggtgaaggca
ttcgtttcatttgttcgggcgtattctaaacatgaagcgtcatatatcttccgtgttaaa
gatctagacctcgttggtctggctaaaagttatggtctgcttcgtctccccaagatgcca
gaactcaaggatattgatcccaaggaatgggaagacgcggacgtcgactggaaagaatac
gcctatgcggacaagttgcaggagactaaacgcatggtgactttatcgaagttctctgaa
gaacaacaacgtgcgagaaagcagagggctgagaaggcggcaaacaagaaagcaaatacc
gcctggagtggaaagatggaccagaaggaagagcgggaaaagagaaaggagaaaaaggcc
aacaaaaagaaatggtccaaagagcaagaatccacgcgacagatggaccaagctctgaaa
agaccaaggggggagcttgaagacgctggcgacgatgactgggaagatatcgcgagggaa
gagcggatggctaagaaggttcgcaagggagaaatcagccagaaagcatttgagagtgaa
ttcaccaatctctaa
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