Marasmius oreades (fairy-ring mushroom): E1B28_004355
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Entry
E1B28_004355 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E1B28_004355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_004355
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
E1B28_004355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
66073431
NCBI-ProteinID:
XP_043013428
UniProt:
A0A9P8ACZ7
LinkDB
All DBs
Position
2:2163016..2165662
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AA seq
686 aa
AA seq
DB search
MPPSREPSLSLLFHPKKNKKPTANSPRRNPASGTAPRPPKTSSASPASTPSVKTEEKVTP
TVEQDDTDTDTFKMPTGPYQEFKLMSSALNGWKFDVMKFDSRKVVDLSAWQQPVKLNRKD
LRREDPETANAGMPLRPMLGLDGQQVYGADGRPVMVDAEGKPVVENGAGSSSSGKGKGGA
NGPGKKKFQKKTKQVFIVPDEIRALRREERYPWVIEDAIGQETWVAQLDEISKSETHGFF
MPAATGDIFKFVPSHRWYRFQKKLKHDLPTDTLTVETAYQKSQKRDPTAWLRQRNGKGPS
AATAATFKAEAEGRVSLGGAGSLVQHVGTSLGPGGRRLRAVDSGGGLFGDDDEDGDVKKR
REREYGGEGDLDENVFEEEFADDEEKMDVDENDQEAKELEERLKREYKTANKTREGYIDE
SDDEDEKPTTSQQGKAMKKMLKKREEGDAYESEEEENPYASSAEEEEEEEEATPQTGPAV
MQQSQQLQPKQEPTEPSIPKVASPPLQNLRNGSASPLPSAPNSPSSGHSIVAKRATSPKV
PKLKTENGSRASSPLASSRAGSPVSTTNGQTQPQLKKRKAEDSVPSPTSPTGQQQPKAKK
RKNTIQSGPPVPTGPLEEWMLVDWLKNTPNASTRECIQHFGPYLTDETEKSRFTALVKEL
ASLKNGKLILKSTYRGSTGPTTPVAS
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcctccatccagagaaccttcgttgtcactactctttcacccaaagaaaaacaagaaa
ccaacagcgaattccccccgtcgtaatcctgcttccggaacagcaccacgaccccccaag
acctcatctgcgtcaccagcctccacaccgtccgtaaaaaccgaggaaaaagtgactcca
acagtcgaacaagatgacacagacacagacacgttcaaaatgccaactggtccttaccaa
gaattcaagctcatgtcttcggcgctcaatggttggaaattcgacgtgatgaagttcgat
tcgaggaaggtggtggatttgagtgcgtggcaacagccagtcaaattgaataggaaggat
ttgaggagagaggatccagagacggctaatgctggcatgcccttgaggcctatgcttggt
ttggatggacaacaggtgtatggagcggatggtagacctgtcatggtggatgccgagggt
aaacctgtcgtcgagaatggtgctgggtctagtagcagtgggaagggcaagggtggagcc
aacgggcctggtaagaagaagttccagaagaagacgaagcaggtgtttatcgtaccggac
gaaataagagcgctgaggagagaggagagatatccgtgggtgatagaagatgctatcggt
caggaaacatgggtagctcagctagacgagatcagcaagtcggaaactcatgggtttttc
atgcccgcagcaacgggcgacatattcaagtttgttccttcacatcgatggtacagattt
cagaagaaactcaagcatgacctgcctacggatacactgacggtggaaactgcttaccag
aagagtcagaagagagatcctacagcttggttacgccagaggaatggtaaaggaccatcc
gcggctaccgctgctacattcaaagcagaagcagaaggacgggtctctttaggtggcgct
ggatctctcgttcagcatgtagggacaagcctgggtcctggtgggcgcagactgagggca
gttgatagtgggggcggactttttggagacgatgacgaagatggcgatgtgaagaagcgg
cgagaaagagagtatggaggtgaaggtgacctggatgagaacgtttttgaggaggaattc
gccgacgacgaggagaagatggatgtcgatgaaaacgaccaggaggctaaagaactcgag
gaacgccttaagagggagtacaagactgccaacaagactcgtgaaggatacatcgacgaa
tcggacgatgaggatgagaaacctacaacttcacagcagggaaaagcaatgaagaagatg
ttgaaaaaacgtgaagaaggtgacgcgtatgaaagtgaggaggaagagaacccctacgca
tcttcggctgaagaggaagaggaagaggaagaggctacgcctcagacaggaccagctgtc
atgcaacagtctcagcaactccagcccaaacaagagcccacagagccgtcgatacccaag
gtagcatctccaccactacagaacctgcgaaacggttcagcatcaccgcttccatctgcg
ccgaattccccatcatctggtcattcgattgtggccaaacgcgctacatcacccaaagtt
cccaagttaaagaccgaaaacggtagccgagccagtagtccactggcttccagtcgtgcc
ggcagtcccgtctctactactaatgggcaaacacagccccagcttaaaaaacgaaaggca
gaagattcagtaccctccccgacttcccccaccggacaacagcagcccaaggcgaagaaa
cggaaaaataccattcaatctggtccacctgttcccacgggtccattggaagaatggatg
ttggtggactggttgaagaatacgccgaatgcgtcaacaagggaatgtattcaacacttt
ggaccttatctcacggatgaaacggagaaaagccggttcactgcattggtgaaggagctc
gcgtctctcaagaacggaaagcttatattgaaaagcacctatcgcggttctactggacct
actactccggtggcttcatag
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