Marasmius oreades (fairy-ring mushroom): E1B28_005491
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Entry
E1B28_005491 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Brite
KEGG Orthology (KO) [BR:
more00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
more01009
]
E1B28_005491
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_005491
04131 Membrane trafficking [BR:
more04131
]
E1B28_005491
03036 Chromosome and associated proteins [BR:
more03036
]
E1B28_005491
Enzymes [BR:
more01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
E1B28_005491
Protein phosphatases and associated proteins [BR:
more01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
E1B28_005491
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
E1B28_005491
Membrane trafficking [BR:
more04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
E1B28_005491
Chromosome and associated proteins [BR:
more03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
E1B28_005491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
Motif
Other DBs
NCBI-GeneID:
66074567
NCBI-ProteinID:
XP_043011141
LinkDB
All DBs
Position
3:581758..583664
Genome browser
AA seq
471 aa
AA seq
DB search
MSSQNVDMAVDEPAHWPEPPLPPPARSYSVPLYEPDLTVGYVYSAEMTNHYDSKEHPEDP
KRITSIWRAIIKAEYHQRMKCIPIRPVKRHEALLVHSEDHWDKVLAIEHMTPQQIVDSSE
YYEQLSLYVMQGTTRAACLSCGGAIEACLAVARGELQKTFAIIRPPGHHAEPDEHMGFCL
FNNVAVGARVVQQSTDIKRILIVDWDVHHGNGTQKAFNDDPSILYISLHRYEGGTFYPCG
PFGGLQSCGEGPGLGYSVNIPWSEKGMGDADYIHAFQKVVMPIAMEFAPELVIISAGFDS
ALGEELGECHVTPTGYAHMTHMLSGLAGGRLVVALEGGYNVEVTTKSAMAVLKVILGEPP
DELPPLVASESATEVVWLAAKEQSKHWRSVDPKLCEPREEVEPITFSIPEILKAHRQYYL
QSVHNMMTVPLLGDELNKKLSSQIMCTHDLFENDTMVVFAHELWDPLSLSD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcagaatgtggacatggccgtagacgaacctgcacactggcccgaacctcca
ttacctccgcctgctcgttcatattctgtaccgctctacgagcctgacttgacagttgga
tatgtctattccgctgaaatgaccaaccactatgattccaaggaacatccagaagatcct
aaacggataacaagtatttggagggcaataatcaaggcagaataccatcaaagaatgaaa
tgcataccgatacgccccgtaaaaagacacgaagcgcttctggtacatagtgaggaccat
tgggataaggtattagcaatcgaacacatgactccacaacagatagtcgattctagcgaa
tattacgaacagctttctttatatgttatgcaaggaacaactcgcgccgcttgccttagt
tgcggaggcgcgatagaggcctgtctggccgttgcccgtggagaattgcagaagacgttc
gctatcatacgacctccaggtcatcatgcagagccggacgagcatatgggattttgcctc
ttcaacaatgttgcggtgggagctcgagtcgtacagcagagtacagacatcaaaagaatt
ttgatagtcgactgggacgtgcatcacgggaacggtacacaaaaggctttcaatgatgac
ccgtctatcctatacatatctctccatcgttatgaaggaggaacattctatccatgtggc
ccgttcggtggcttgcagtcttgcggtgaaggacctggacttggatattcagtcaacatc
ccgtggtctgagaagggtatgggagatgccgattacatacatgcctttcaaaaggttgtg
atgcctatcgcgatggagttcgcgccagagttagttatcatctccgctggttttgactca
gcacttggcgaagaactcggagaatgtcatgtcaccccgacaggctatgcgcacatgacc
catatgctttctggtttggctggcggaaggctggttgttgcactggagggtggttacaac
gtcgaagttacgactaagtctgcaatggcagtcttgaaagtcattttaggagaaccgcct
gatgaactgccccctctggttgccagtgaatcagctactgaagtcgtttggcttgccgca
aaggaacaaagcaagcactggaggagtgtcgatcccaagctttgcgaaccacgcgaagag
gtcgaaccgatcacattttccataccggagatcctcaaagcccaccgacaatattatctt
caatccgtccataacatgatgacggttcccctcttgggtgatgagcttaacaagaagctg
tccagccaaattatgtgcacccatgatttgttcgagaatgataccatggtcgtgttcgca
catgaattgtgggatcccctatctctttctgattag
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