Marasmius oreades (fairy-ring mushroom): E1B28_005564
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Entry
E1B28_005564 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_005564
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_005564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_005564
03041 Spliceosome [BR:
more03041
]
E1B28_005564
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
E1B28_005564
mRNA degradation factors
5'-3' decay
Lsm complex
E1B28_005564
Spliceosome [BR:
more03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
E1B28_005564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
66074640
NCBI-ProteinID:
XP_043011217
LinkDB
All DBs
Position
3:complement(800230..800702)
Genome browser
AA seq
95 aa
AA seq
DB search
MSSLQGYVDKRVLLVLQDGRSIVGIMAGYDQKSNVVLSDSKERVYSMEEGVEEVPLGLYL
VKGDMIILIGEIDENIDQAVDLSTIHAEPLPPIRH
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgtccagccttcaaggctatgtcgacaagcgcgttctgcttgttttgcaagatggaaga
tcgatagtgggaataatggcaggttacgaccaaaaatcaaatgttgtgctttccgactcg
aaagaaagagtttatagcatggaagagggcgtcgaagaggttccattgggcctgtatttg
gtcaaaggcgacatgataatcctcatcggtgaaatagatgaaaacattgaccaagcagtc
gacctctccacgattcacgcagaaccattaccaccaattcgacattag
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