Marasmius oreades (fairy-ring mushroom): E1B28_005777
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Entry
E1B28_005777 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14315
nucleoporin NDC1
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
E1B28_005777
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_005777
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
E1B28_005777
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
MAAL_C
Motif
Other DBs
NCBI-GeneID:
66074853
NCBI-ProteinID:
XP_043011450
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All DBs
Position
3:complement(1384956..1387531)
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AA seq
678 aa
AA seq
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MSRTSTPVRAIPSNLSSKSALSAPSPVQTYEPFVKATLRQRLTSKVFLLSAIFSWFQAFC
WSIWARGGFRFLGFSGVLMSLIQPLTILGGLANWMVVAVPVVVLRKLYLHPARTRASSPA
KTWHAAWVKPSTRRSLSVLCASALLSTAISVLSAHLVETDVQGDPRLSLFVQSKKHPQYL
NGRLIFLIITQLIMAGSFIVRDVMLDRFVFRWSFSQVKFGLLDLFQAILFAAVLTSASMA
VAAYVFALLRLSLPVLYRIPVLPMLLRPFTAHFLRGSWTFLLPFYHYRLLVRAWFLGFTT
IANWEFSEALFDSFISQPIRVSHYTADATVTMVSGVTSLDRTFKFFALLELQEFAADSSS
TGSTRRTEFFGNQKYSPPLWSQLCRELLILLGQDYQLFLRRGAPLSLAPPPAKEVVSRPV
NGPPMTPTQLINKPIFQSGKKSPIKTVLDSLAADGSLSQAVEAGAEAAHLPEALKSVEDA
LFKPGLEKSKGEVTKGINGAKSLMERTKTAFYGATQGFTPQWMGTALSGARSWWSEDRLS
KIAEGCVPFRELDAAAIDVLSRLVCASLKEDRYGVVQRDTPKILEAMLSFLSAIEEYQLE
INARLEPPSTQEQATAEEVVQREALRMEIEKAGEHLGVICNELKEGVGRIVQTFGDKLQA
FKFPPHTARKLQGFLDYC
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcgtacgtcgacgcctgtacgcgccataccctcaaatctgtccagtaaatcagcc
ctttcagctccttctcccgttcaaacatacgaaccattcgtgaaagccactcttcgccaa
cgtctcacctccaaagtctttctgctttctgcaatatttagctggttccaggcattctgt
tggtcaatttgggctcgcggcggattcaggttcttggggtttagcggtgtcttgatgtca
cttattcaaccgctgacaatcttgggtggattagccaattggatggtggtcgcagtccct
gttgtggttctccgaaagttgtatctgcacccggcacgaacgcgagcaagttctccagcg
aaaacttggcatgcagcctgggtgaaaccaagcacaagacggtccctctcagtgctttgc
gcatctgcacttctttctaccgcaatctctgtcctctctgcacacttggtcgaaactgat
gtccaaggagatcccaggctctccctctttgtccaatcaaaaaagcaccctcaatacctc
aatggcagactcatattcttaatcattacacagctcatcatggcgggcagtttcattgtt
agggacgtgatgcttgatcgtttcgttttccgctggagcttctcacaggtcaagtttggc
ttgctcgacctctttcaagccatattgttcgccgccgttctcacctctgcatccatggca
gtagcggcctatgttttcgctcttcttaggttgtcacttcccgtcctctacagaattccc
gttctacccatgctgttacggccatttactgcacatttcctccgtggttcgtggacgttt
cttctaccattctaccattaccggcttctggtccgagcatggttcctcggtttcacgacg
atagccaactgggaattttctgaggcactcttcgactcgttcatttcgcagccgattagg
gtgtcgcattatactgctgacgccactgtaacgatggtttccggtgtcacctctttggat
cgtacattcaaattcttcgcactattagaactccaagagtttgctgcggattcatcttca
accgggagtacgcgcaggacagagtttttcggaaaccagaaatactctccccccttatgg
agccaactgtgtcgagagttacttatccttctcggccaagattatcaactattcctacgt
cgaggtgccccattgtcacttgcacctccgcctgcgaaggaagtggtatctcggcccgtt
aatgggcctcctatgaccccgactcaactcatcaataaaccgatattccagtccggtaaa
aaatcgccgataaaaaccgtccttgactcactagctgcagatgggtctctttcacaagct
gtggaggcgggagctgaagcggcacatctgccggaagccttgaagagcgtggaagatgcc
ctctttaagcctggcttggagaagagtaaaggggaggtcaccaaaggtattaacggtgcc
aagtccctaatggaacgcacaaaaactgcgttttacggcgccacgcagggattcacccct
caatggatgggcacggcattatctggtgcaagaagctggtggtcagaagatagactaagc
aagattgcggaaggatgtgtgccgttccgcgagctggatgctgctgctatagatgtgtta
tcccgtttagtttgtgcgtctttgaaggaggatcggtacggggtcgttcaacgagatact
ccgaagatactggaggccatgctatcgttcttatcagcgatcgaggaatatcagcttgaa
atcaatgctcgccttgaaccaccttcaactcaagagcaagcaacggctgaagaagttgtg
cagagggaagccttgcggatggagatcgagaaagcaggtgaacacctcggtgtgatctgc
aatgaattgaaagagggagttggtcgaatcgtacaaactttcggggacaaattacaagca
ttcaaattccctccccatacagcacgaaaacttcagggtttcttggattattgctag
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