Marasmius oreades (fairy-ring mushroom): E1B28_006543
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Entry
E1B28_006543 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03082
ATP-dependent chromatin remodeling
more03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
E1B28_006543
03083 Polycomb repressive complex
E1B28_006543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
more03036
]
E1B28_006543
Enzymes [BR:
more01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
E1B28_006543
Chromosome and associated proteins [BR:
more03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
E1B28_006543
HDAC complexes
Sin3A-HDAC complex
E1B28_006543
BRAF-HDAC complex
E1B28_006543
REST complex
E1B28_006543
SHIP complex
E1B28_006543
MiDAC complex
E1B28_006543
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
E1B28_006543
Heterochromatin formation proteins
Other heterochromatin formation proteins
E1B28_006543
Chromatin remodeling factors
NuRD complex
E1B28_006543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
66075619
NCBI-ProteinID:
XP_043012318
UniProt:
A0A9P7S8Q6
LinkDB
All DBs
Position
3:complement(3581313..3583491)
Genome browser
AA seq
571 aa
AA seq
DB search
MSKRRVAYYYDPDVGSYTYGIHHPMKPHRIRIAHELVGAYDMFGKMQIVKPKRATPEAMT
TFHTDEYIHFLKRVTPETAEELTYHGTRFLVGDDNPPFEGVFEFCSISAGGSIAAADRVA
SGAADIAINWAGGLHHAKKREASGFCYINDIVLGILELLRTYPRVLYIDIDCHHGDGVEE
AFYTTDRVMTVSFHKYGEYFPGTGTQEDRGRDRGKGYAINVPLKDGVADESFQSIFEPIM
AKIIDVYRPSAIVLQCGADSLSGDKLGCFNVTMEGHAHCVQFIRRYNIPLILLGGGGYTI
KNVGRVWTYETACALGIEKEIDLNLPWNEYFEWFGPRYRLEVVASNMDDMNVKDGSLDKV
RAIALEQLRELEGAPSVGIHDTPRESLATHLGFGKDDSERRDELDERLAQHARYVYHLQE
SDTASSSSSSEEEEESVYDSDESNTSRGSRSGLRSQSHPRVRRFPPHRNNLRKRMSLLTG
RYYDVPVQEEGYEHYETIGAPGKSAKRRFFQSHATWDENYRKVHVGRRLENGIDDHSRLI
PAELMERGGRGLGDDDVQPVDEDWDEMAIES
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaagaagagtggcttattattatgaccccgacgtcggttcttatacatacgga
attcatcaccccatgaaaccacatcggatacgaatagcacatgaactcgttggtgcctat
gatatgtttgggaaaatgcagatagtaaaaccgaaacgtgcaactccagaagctatgacc
acctttcacaccgacgaatacatccacttcttgaaaagagtaacgccagagacggcagag
gagttgacataccatgggacgcgatttttggttggggacgataaccccccttttgaaggc
gtgttcgagttctgttcaatttcagccggaggctctatagctgctgcagaccgtgtcgct
tcaggggcagcagacatcgctattaattgggctggcggtcttcaccacgccaaaaagcgc
gaagcctcagggttttgctatatcaacgacattgttttgggtatactggaacttctacga
acatatccgcgagttctatacattgacatcgactgccatcacggagatggcgttgaggag
gccttctataccaccgaccgcgtcatgaccgtcagtttccacaaatatggagaatatttc
cccggtactgggacacaggaagacagaggaagagataggggaaagggatacgctattaac
gttcctctgaaggatggagtggcagacgaatcgtttcagagcatatttgaaccgatcatg
gcgaaaatcatcgatgtgtatcgcccttctgctatcgttctccaatgcggtgccgactcg
ctctctggagataagcttggctgcttcaacgtaacgatggaaggacacgcacattgcgtg
caatttattaggcgatacaacatacccctcattttgctgggtggtggaggttatactatc
aagaatgttggccgtgtgtggacgtacgagactgcttgtgctctggggatagaaaaggag
attgatctcaatttaccgtggaacgagtactttgaatggtttggcccgcgatataggctt
gaagtcgttgcgagtaatatggatgatatgaatgtgaaggatggctcgctggacaaggtt
cgcgctatcgccttagagcagcttagagagctagagggcgctccatccgttggaatacac
gatacccctagagaaagccttgcaacacatctaggatttggaaaggacgatagtgaaagg
agagatgaactagatgaacgcttagctcaacacgctcgttatgtataccacttacaagag
tctgacacggcgtcctcgtcttcatcttccgaagaagaggaagaatccgtttacgattct
gatgaatccaatacctcgcggggaagtcgatctggccttcgctctcaaagtcatcccaga
gttcgacgtttccctccacatcggaacaacctcagaaagcgaatgtcactgttgacaggc
cgatactatgatgtacctgttcaagaagaggggtacgaacactacgagactatcggtgcg
cccggaaagtcagccaaaaggagatttttccagagccacgcgacttgggacgaaaattat
cgaaaagtccatgtcggaagacgactggagaacgggatcgatgatcacagtcgtcttatt
cccgccgaattgatggagagaggaggaagagggctcggagacgacgatgttcagcccgtt
gacgaggattgggacgagatggccatagagtcatga
DBGET
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