Marasmius oreades (fairy-ring mushroom): E1B28_007057
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Entry
E1B28_007057 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E1B28_007057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_007057
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
E1B28_007057
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
E1B28_007057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
Motif
Other DBs
NCBI-GeneID:
66076133
NCBI-ProteinID:
XP_043009847
UniProt:
A0A9P7UT17
LinkDB
All DBs
Position
4:complement(862258..864648)
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AA seq
551 aa
AA seq
DB search
MAQGFIPAGAAAPPFGSPWLFESSWDFALEMQHIFDPVTPSSTKEWVGASSFGGGKNAVG
LSTLITERIRELEMEVCLGGNDKGCGPFRVKRKDNGIKESPKRSQHAKNASSERNSDDTN
QRISSVVLPSIKNSETRLRSPSIPSFASTPPPTSQPVSKPRFETPIHLDETLGRLYGLHE
LCKASYTPFELPVTFTNTMKKRRELYSTFTSHAQELRELHHSFQGLLARTDTKIKSQSQR
FGEWLATSKNIQSLLKIERHLAKTKSSRSLDEWYEFGGKDGREVAWLPSSLEELQLQIQL
VNIELKKKKMDAVTRLSLRESNMRRKWHVGRLEIVMGLLLVQDSVPLDMIEQLGRRVVCF
VENNMAEGFQEERGIYDDILRFDDDNWDEDSDCDENSPQETDRDDGLCDALTDDKTDISS
SSPQHSPPPTSIQPDIHNFDTSISGNRTFSHNNVTNTDTTDSHNTNSETNTNSHNVYNNI
TNHHHHNHHHHHRQERRKSRWNITKFVHQHIYLPILWNPYSCLCSHHQTMASSWLHAYLT
WLASSFGSCHR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaaggtttcattccggcaggggccgccgccccgcctttcggttcgccatggctc
ttcgaatcatcatgggacttcgctttggagatgcagcacatctttgaccctgtgactcct
tcaagcacaaaggaatgggttggcgcctcttccttcggtggtgggaagaatgctgttggc
ttgagtacccttatcactgaacggatcagggaattggaaatggaagtgtgtctaggtggc
aacgataagggctgtggtccttttcgagtgaagaggaaggacaatggcataaaggagagt
ccgaaacggagtcagcatgccaagaatgcctcaagtgagagaaattcggatgatacgaac
cagaggatctcttctgtggttctcccgtcaatcaagaactctgaaactcgacttcgtagt
ccctctattccttcctttgcctctacaccgccacctacctcccaaccagtctcgaaacca
aggtttgaaacacctatccatctggatgaaacgttggggagactatacggcctacacgaa
ctgtgcaaagcctcttacacccccttcgagttaccagtcacgttcaccaataccatgaag
aaacgaagagagctatactcgacattcacgagccatgcccaggagcttcgggagctacac
cattcatttcaaggattgctggctcggactgatactaaaataaaaagtcagtcacaacgc
tttggagaatggctcgccactagtaagaacattcaaagcttacttaaaatcgaacgacac
ttggcgaagactaaaagcagtcgttctctggacgaatggtatgagttcggtggaaaagat
ggtcgagaggttgcttggctgccctctagtctagaggagctacagttgcagattcaactg
gttaatattgagctgaagaagaagaaaatggatgccgtgactcgcctatcgctcagggag
tctaatatgagaaggaaatggcacgtgggaagattggagatcgtaatgggccttctgctg
gtacaagatagcgtaccgctggacatgattgaacaactaggtagaagggtcgtgtgtttt
gtggaaaataacatggcggagggttttcaagaggaacggggaatttacgatgacattttg
cgtttcgatgacgataactgggatgaagactcggattgtgatgagaattcaccgcaagaa
actgacagggacgatggattatgtgatgcgttgacagacgacaagacagatatttcttct
tcctctcctcagcattcacctccgcctacttcaatccaacctgatatacataacttcgac
acctccatctcgggtaaccgaaccttcagccacaacaatgttacgaatacagataccaca
gactctcataatacgaatagcgaaactaacaccaactctcataacgtctacaataacatt
acgaatcatcatcaccacaatcatcatcaccaccatcgtcaagaacgccgaaaatcgcgc
tggaacataacaaagtttgtccatcagcacatatacctacctatactttggaatccgtac
tcctgtctctgctctcatcaccagacaatggcgtcgagttggctccatgcatatttgacg
tggctggcctcctcgtttggtagctgtcaccggtag
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