Marasmius oreades (fairy-ring mushroom): E1B28_007347
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Entry
E1B28_007347 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_007347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
E1B28_007347
Spliceosome [BR:
more03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
E1B28_007347
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
PRP4
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_Aladin
WDR90_beta-prop_4th
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_DCAF4
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD_LRWD1
RMC1_N
Beta-prop_WDR75_2nd
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
66076423
NCBI-ProteinID:
XP_043010161
UniProt:
A0A9P7UUU2
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Position
4:complement(1618274..1620363)
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AA seq
504 aa
AA seq
DB search
MAELTYDTLMDDGNYLGSERARLENKVILEELERKKKARTLAVPTDDNRVKARLREIGEP
ITLFGERAADRRDRLIYVLSQINAARGDYSANVEEESSDESEEEEEEFYSPGSMELLEVR
RKIAEYSLPRAQKRIARQRLGSTMELGRIVDIRKKVFTEVKKFANLGSQIGDDRPISQVR
FAPNNQILATGSWSGTVKLWNVPACTPLRTLRGHSDRVGGVAWHPQATLSQGQDLVNLAS
GAGEGNVNLWSLNSESPLSVLKGHQDRVCRVAFHPSGDYLASASFDTTWRLWDVTTSTEL
LLQEGHSKEVYSVEFQDDGALIASGGLDAIGRVWDLRTGRTAMVLDGHVQAIYAIGFSPN
GYQIATGAGDDTIRIWDMRLLKSLYTIPAHLSNVSDIRFFRADDPFMEKAQNMVNGDTEM
LDVDNAHPTPTEHEERAYKSGLFFASAGYDGLVKIWSADDWHLLRTLSTDAGKVMSVDIA
SDGNMIASGTYNRNFQLFAPEDVQ
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggctgagctaacgtatgacacccttatggacgacgggaactatcttggctccgaaaga
gcgaggctggagaacaaagtcatcttggaggagctggagcggaaaaaaaaagcgcgtact
ctggcagtaccaacggacgataatcgtgtcaaggctagactgagggagattggagaacct
atcactctttttggtgaaagggcggcagaccgtcgagatcgtttgatttatgtgctttca
caaatcaatgcagcgcggggtgattactcagccaatgtcgaggaagagtcttcggatgag
agcgaggaagaggaggaggaattctattctcccggttcgatggagctactcgaagttaga
cggaagatcgcagagtactcccttcctagagctcaaaagcggatcgctcgacagcgacta
ggcagtacaatggaattaggtcgcattgttgacatacggaagaaagtgtttacagaagtg
aaaaaatttgccaaccttggttcacaaattggcgacgacaggccgatatctcaagtgcgc
tttgccccaaataatcaaattttagccacggggtcctggtccggaacagtgaagctatgg
aatgtacccgcctgtacgcctctgcgaaccttacgaggacatagcgatcgtgttggtggt
gtggcatggcatcctcaagcaacattatcacaaggtcaagaccttgtaaacctagcaagc
ggagcgggcgaaggcaatgtgaatttatggtctcttaacagtgaatcacctttatctgtc
ttgaaagggcaccaagatcgtgtatgccgtgttgcctttcatccatcaggggattatctt
gcaagtgccagtttcgatactacttggcgcctgtgggacgttactacttcaacagagttg
ctgcttcaagaaggacactcaaaggaagtttattcggtagaattccaagatgacggtgct
ttgatcgcctccggtgggcttgacgccattggacgagtttgggatcttcgaacagggcga
actgccatggttctagatggacatgtacaagcaatatatgccattggattttctcccaac
ggataccaaattgccactggtgctggagacgatacaatccggatatgggacatgcgatta
ctaaaatctctctatacaataccggcgcatctttcgaacgtttccgacatacggtttttt
agggcggatgaccctttcatggagaaagcacagaatatggtaaacggggacactgagatg
ttggatgtagacaacgcccatcccacacccacggaacacgaagaaagggcctacaagtcg
ggactgttcttcgcttcagcaggctacgatggactggtgaagatttggagtgcagacgat
tggcatctgttgcgaaccttgtccactgatgctggcaaggtgatgtctgtggatatcgcc
agcgatggcaatatgatcgccagtggaacttacaatcggaatttccaacttttcgcacct
gaggatgtacaatag
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