Marasmius oreades (fairy-ring mushroom): E1B28_008317
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Entry
E1B28_008317 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Brite
KEGG Orthology (KO) [BR:
more00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
E1B28_008317
Enzymes [BR:
more01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
E1B28_008317
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GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
DUF1522
Motif
Other DBs
NCBI-GeneID:
66077393
NCBI-ProteinID:
XP_043008393
UniProt:
A0A9P7US04
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Position
5:817264..821135
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AA seq
543 aa
AA seq
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MLAYFLVYAALLLPPVWAAFGLTESGNSYVVDTDGGLVFTVDKTSGDVTSMKYNGKEAQD
SSKHSQISSGIGATCGWVRTGNSNNYIKITCTTSTLTHYYVAKYKDPSIHMATYTTAEPS
VGELRYIARLARSTVPNGYAASNVDGGSAIEGSDVFLVNGQTRSKFYSSRQFIDDQVHGV
TGSAIGIYMVIYGNGYEASSGGPFFRDINNQGGSVQELYFCECIATFSCEHTSDGIFVRI
DMNSGHTQTEGWRTGLHGPYALVFTSGAAPSANIDPLFWEGLGVQGYVGNSGRGRVSGKA
SGFPSQFASLISVGFSNSQNQYWVRTDTSGNFVTPYMKPGTYTMTLYKVELAIGSQSATV
SAGGTTSANIASSEANPAVIWQIGDFDGTPRGFLNADKIETMHPSDSRMASWGGKTFTVG
NNVNTFPMAIFKDIGGVTIKFTLTSSQLGARTLQIGTTLAFAGGRPVVVVNSWTSAIPAI
PSQPDSRGVTRGTWRGNNIMYTYNIPAGTLIAGTNTISITVASGSSGAQFLSPNIVFDAL
RLY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgtactttctcgtctatgcggcactgctgttacccccagtgtgggctgccttc
ggcttgacggaatccggaaactcgtacgtagtcgacactgacggtggtctcgtcttcacc
gtggacaaaacttctggagacgtcacctcgatgaagtacaacggcaaagaagctcaagat
tcaagtaagcacagtcagatttcgtctgggattggagcgacgtgcggttgggtacgtacg
gggaactcgaataattatatcaagattacttgcacgacctcgaccctcactcactactac
gtcgcgaaatacaaggacccttctattcacatggcaacatatactactgctgagccttca
gtcggagaactgaggtatatcgcccgtctcgccaggtctaccgttccaaatggctatgca
gcctcgaatgtggatggcggtagcgcaatcgagggctccgacgtattcctcgttaatggc
cagacacgttccaagttctactcttcccggcagttcatcgacgatcaggtacatggtgtc
accggaagtgctatcggaatatatatggtcatttacggaaatggctacgaagccagctct
ggtggacctttcttccgagatatcaataatcaaggaggctctgttcaggaactctacttc
tgtgagtgcattgctacattttcttgcgaacatacgtctgatggaatattcgttcgaata
gacatgaactctggccatacacaaaccgaaggctggaggacgggtctccacgggccatac
gccctcgtgttcacatccggtgctgcaccatctgctaacatcgacccgctcttctgggaa
ggcttgggtgtccaaggttacgttgggaattccggtagaggtcgcgtcagcggcaaagcc
agtggtttcccatcccagtttgcgtctctcatctctgttgggtttagtaactcccaaaat
caatattgggtcagaacggacactagtggaaactttgtcactccgtatatgaagcctgga
acatacacgatgaccctctacaaagtcgagttggctatcggcagtcaatccgccacggtc
tctgcgggtggcacgacgagcgcgaacattgcttcttccgaagctaacccagcggttatt
tggcaaattggtgactttgatggaactccccggggattcttgaatgcagataaaatcgaa
acgatgcaccctagtgattcccggatggcgagctggggtggaaagactttcaccgtcggc
aacaacgtcaacacgttcccaatggcgattttcaaggacatcggaggtgttacgatcaag
ttcacgctcacgtcctctcaacttggagctcgaactctacaaatcggaacaaccctcgcc
ttcgcaggcggacgtccagtcgtagtggttaacagctggactagtgctatcccggcaatt
ccaagtcagcctgattctcgaggtgtcactcgtggaacttggcgaggaaataacataatg
tacacttacaatattccggcgggaacactcattgctggtacaaacacaatcagcattacg
gtcgcctctggttccagtggtgctcaattcctttcgccaaacatagtgttcgacgcgttg
cgtttgtactga
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