Marasmius oreades (fairy-ring mushroom): E1B28_009188
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Entry
E1B28_009188 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
E1B28_009188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_009188
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
E1B28_009188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
DUF3591
Motif
Other DBs
NCBI-GeneID:
66078264
NCBI-ProteinID:
XP_043009346
LinkDB
All DBs
Position
5:3181080..3182426
Genome browser
AA seq
345 aa
AA seq
DB search
MEEVVEDKKSFEPDLAQDGDSLPDPDEQLMLDQGGGRVWLVKVPRFLMERWAAINAEDVH
LASIRVYHNTNPGAKPRILLFLPPHESNVNTKDPKWPTFDNTIGNITTDSEPDCYELEMV
NDSVENQVVIAERPKDSSFGLSSSVQSGPPNPRARTTILTGRIKHDCSLRPQFSANYRKQ
IRERHKKYNTRVRQIRVMEDADVPGGRGSINRLSSGVGLGGSGAFSDLVKTKPKPTKGNF
ERMTRMPRNQLLDLLFQLFRETTRWAIKPLREKTQQPEVYLKEVLSEVAFLHRSGEHNGF
WELKDNFKEDGIKGEDVVGISFDDVKMEEMEDDEDDDDDDMEEVS
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagttgtggaagacaagaaatcgtttgaacctgatctcgctcaagatggtgac
tctcttccagacccagacgagcagctcatgttggatcaaggtggtggaagggtttggctt
gtaaaggtcccaagattcctcatggaacgatgggccgccataaacgcagaagacgtccat
ctcgccagtatacgcgtctaccacaataccaacccaggagccaaacctcggatcctcctc
ttcctcccccctcacgaaagcaacgtcaacaccaaagaccccaaatggcccacattcgac
aatacaataggaaacataacaaccgactctgaacccgattgttacgaactcgaaatggtc
aacgattcggttgagaaccaagtggtgatcgcggaaagacctaaagactcttcgtttggt
ttatcttcttctgttcagtctggccctccgaatccgagagcgaggactacgattctgacg
gggaggattaaacatgattgtagtttgagacctcagtttagtgcgaattataggaagcag
attcgggagaggcataagaagtataatacgagggttaggcagattagggttatggaggat
gcggatgtgcctggtggcagagggagtatcaaccggcttagtagtggtgttggacttgga
ggatcgggagcgtttagtgatcttgttaaaacgaaaccgaaaccgacgaagggcaatttc
gagcgtatgacacggatgcccaggaaccaacttctcgatttgttgttccagctgttccga
gaaacgactcgatgggctattaagcctcttcgagagaagacgcaacagccggaggtttat
ttgaaagaagtgctttcggaggtagcattcttacatcggagtggagaacacaatgggttt
tgggagctcaaggataactttaaggaagacgggataaagggagaagatgttgtaggaatt
agcttcgatgatgtcaagatggaggagatggaggacgacgaggacgatgatgatgatgat
atggaggaggtttcatga
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integrated database retrieval system