Marasmius oreades (fairy-ring mushroom): E1B28_009984
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Entry
E1B28_009984 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K15078
structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
E1B28_009984
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
more03400
]
E1B28_009984
DNA repair and recombination proteins [BR:
more03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
E1B28_009984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIY-YIG
SLX1_C
AT_hook
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
66079060
NCBI-ProteinID:
XP_043007377
UniProt:
A0A9P7RWW5
LinkDB
All DBs
Position
6:complement(1777890..1779815)
Genome browser
AA seq
528 aa
AA seq
DB search
MPSTRKTRNGTRSSLLTHGFPTFYACYLLKSIKSISSKATYIGSTPDPPRRIRQHNGELS
QGAYKTRNKRPWVMQLIVYGFPSKLAALQFEWAWQHPHVSRHIRDSSGKRIFNASGRYLN
RNVEILRHMISIHPYNTWPLQLKIFTREAQKCWENASKAKDGNPASSPLPRGFTISVELE
GVDGKTGFVGTGRTRPIEVKDEGFSSNHVKKNLDLLASSKQLVCAVCKEGLTDYTNDPLS
HTLCPEVSCVSAAHLTCLSHKFLLEESISSKTRPMIPRGGICPGCSHYVLWGHVIKGLYR
RSVGGVRSAMEDDMNEDVEHGEMFASDSDEDITSPASVRKPQSLSSSKGKAKASSSEGEY
FDFSTVDAYISSAEEVSTTRVLRPATLSPRKLTTTLKAPSKRQRTKIPLSRKSQSSEGEA
VDFDKVEMSSSAATPKRKRGRPAKTSTTLHSGVGSKKGRPSRTPSSPPTQIISRSISSCE
VPKFRNLYDSDDATDMDIPHSEYQDVLVRSMSSLTVSSPSPAIIEISD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaacccggaaaactcgtaatggcacacgctcctctcttctaacccatggcttc
ccgactttttatgcttgctaccttctgaaatctatcaagtcaatatcatcaaaggcgact
tacattggaagtactcccgatcctccgagaaggataaggcaacacaatggcgagttatct
caaggggcatataaaaccagaaacaaacgaccatgggtgatgcaactcatcgtatatggt
ttcccttcaaaattagcagcacttcagtttgaatgggcgtggcagcatccacacgtctcc
agacacattcgagattccagtggcaagcgaatcttcaacgccagtggacgatacctgaac
cggaacgttgaaattctacgacatatgatatcaattcacccttacaacacctggcccctc
caacttaagatattcacccgtgaagctcagaaatgttgggaaaatgcttcaaaggccaaa
gacggcaatccagcatcgtcgccgcttcctcgaggcttcaccatatcggtcgagttggaa
ggagtggacgggaagacgggcttcgttggaacgggcagaacgaggccaatagaggttaag
gatgagggtttctcgtcaaaccacgttaaaaaaaacctagatctccttgcttccagtaaa
caactggtgtgtgcagtctgtaaggagggtttgacggattacaccaatgatcctctgtca
cacacattatgcccagaagtatcctgtgtatctgcggcgcatctgacttgcctctcccac
aagtttcttttagaagaatccatctcttccaagacgaggccaatgatccctagaggtggc
atttgtcccggttgttcgcactatgtcctctggggtcacgtaatcaagggattgtaccgc
cgttctgtagggggggtgagatcggcaatggaggacgatatgaacgaggacgtcgaacac
ggggaaatgtttgcttcggacagtgatgaagatatcacttcacctgcgtccgtacggaaa
cctcaatcgctaagctccagcaaagggaaagcgaaagcgagtagcagcgaaggggaatat
ttcgatttcagcacggttgacgcctatatctcctcagcagaggaggtctccactacaaga
gtattgagacccgcgacattgtctccgagaaaactaactacaaccctcaaggctccaagc
aaaaggcagaggacaaagattcctctaagtcgcaaatctcagagcagtgaaggagaagca
gttgacttcgataaggttgaaatgtcttcatctgcagccacaccaaagcgtaagagaggg
aggcctgcgaaaacctcaacaactttacactctggggttggatctaaaaaaggtcgacca
agcaggacaccctcatcaccacccacgcagattatatcccggtcgatcagttcctgcgaa
gtcccgaaattccgcaacttatacgattcggatgatgccacagacatggatatacctcac
agtgaatatcaggatgtcctggtgaggtccatgtccagtttgacagtatcatcgccttca
cctgccatcatcgagatctcggactag
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