Marasmius oreades (fairy-ring mushroom): E1B28_010384
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Entry
E1B28_010384 CDS
T08156
Name
(RefSeq) uncharacterized protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
E1B28_010384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
more03021
]
E1B28_010384
03019 Messenger RNA biogenesis [BR:
more03019
]
E1B28_010384
Transcription machinery [BR:
more03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
E1B28_010384
Messenger RNA biogenesis [BR:
more03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
E1B28_010384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_2
Torus
zf-CCHC
zf-CCCH_4
zf-CCHC_3
zf-CCHC_2
zf-CCCH_RBM22
Motif
Other DBs
NCBI-GeneID:
66079460
NCBI-ProteinID:
XP_043007811
UniProt:
A0A9P7RY75
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All DBs
Position
6:complement(<2823853..>2824945)
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AA seq
288 aa
AA seq
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MTAIATPSSIRDVVNPQFHQNNFAAESFVKGELGLKLDKDDQICRLSLTAAGCPLGPLHC
PLRHTVPSSQNFQPPKQLPTHPRERERLATVCKHWLRGLCKKGDACEFLHEYNLRRMPEC
WWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPSCPRKHIRRVACQLYLTGFCP
LGPECPRGHPKPGIPPAKAYDPPSPPSNRDLGPPPPGYGRYADFDRGAGSGPNYAGGTNP
SGMQPRRNLDEVLCFKCGEKGHYANHCRNRNVPGSRGGVERTKRIGEE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaatcgctactccttcatctatcagagacgtggttaatcctcaattccatcag
aataattttgctgcagagtcttttgtcaaaggggaacttgggctgaaacttgataaagat
gaccagatttgccgtttgtcgcttaccgctgcaggatgccctctaggaccccttcactgt
cccctacgacacacagtcccttcttcccagaacttccagccaccaaaacaacttccaaca
catcctcgagaaagagaacgtctggccaccgtgtgcaagcactggctccgtggtctctgc
aagaaaggcgacgcttgtgaatttctgcatgagtataatctcaggcgaatgccagagtgc
tggtggttcgcaaagtatggttactgttctgcaggagacgaatgtttatacgcgcacccc
aaggagcgtaaaatagaatgcccagactataaccgaggattctgcaagctcggcccttca
tgccctcgaaagcatataagacgtgtcgcatgtcagttgtatctgacgggattctgtcca
ttaggccctgagtgccccagaggccacccgaaacctggcatacctccagcaaaagcttat
gatcctccctctcccccgtcaaatcgtgaccttgggccgccaccgcctgggtatggtcga
tacgctgattttgaccgtggggcgggtagtggcccgaattacgcaggtggtaccaaccct
tctggaatgcagcctagacggaatttggatgaggtgttatgtttcaagtgtggagaaaaa
gggcattacgctaatcattgtcgcaatcgcaatgtcccaggtagtcgcggcggagtcgag
aggacaaagaggatcggagaagaatga
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