Marasmius oreades (fairy-ring mushroom): E1B28_011331
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Entry
E1B28_011331 CDS
T08156
Symbol
DBP2
Name
(RefSeq) ATP-dependent RNA helicase dbp2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
more
Marasmius oreades (fairy-ring mushroom)
Pathway
more03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
more00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
E1B28_011331 (DBP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
more03041
]
E1B28_011331 (DBP2)
03009 Ribosome biogenesis [BR:
more03009
]
E1B28_011331 (DBP2)
Enzymes [BR:
more01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
E1B28_011331 (DBP2)
Spliceosome [BR:
more03041
]
Complex A
U1 snRNP components
U1 related factors
E1B28_011331 (DBP2)
Complex B
E1B28_011331 (DBP2)
Ribosome biogenesis [BR:
more03009
]
Eukaryotic type
Pre-60S particles
Helicases
E1B28_011331 (DBP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
P-loop_SecA
DUF2443
Cas3-like_C_2
Rod_N
Motif
Other DBs
NCBI-GeneID:
66080406
NCBI-ProteinID:
XP_043006141
UniProt:
A0A9P7UR34
LinkDB
All DBs
Position
7:complement(1783851..1786539)
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AA seq
521 aa
AA seq
DB search
MSYNGNGGGGRNGYSNGYSANTFGGGGWNDDKMGNLGGGLKNVDWSRQKVQHFEKNFYIE
DKRVSARSDREIEDYRRSKEIKVQGRGVPRPVTSFEEAGFPEYLMATIRAQGFAAPTPIQ
CQAWPMALSGRDVVAIAQTGSGKTISFALPAMLHINAQPLLEPGDGPIALVLAPTRELAV
QIQQECTKFGSNSRIRNTAIYGGAPKGPQIRDLQRGVEVVIATPGRLIDMLETNKTNLRR
VTYLVMDEADRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWPKDVQKLANDFLRDFIQCN
IGSMELTANHNITQIIEVCSDFEKRNKLINHLEKIASEDAKVLIFVATKRVADDITKYLR
QDGWPALAIHGDKEQRERDWVLSEFKAGRSPILIATDVASRGLDVKDVRYVINYDFPNNC
EDYIHRIGRTGRAGLTGTSYTYFTTENAKSARELVGILREAKANVPPQLEEMIMIGGGGG
GRSRFGASRGRGGGRGGGGGGGGGGNRYGGDSGWSGRSDRW
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgagctacaacggtaatggtggtggtgggcgcaatggctacagtaacggatacagtgca
aacactttcggtggcggaggttggaacgatgacaaaatgggcaatttgggtggtggcctg
aagaacgttgactggagccgtcaaaaagttcagcattttgagaagaatttctacatcgaa
gacaaacgtgtgtccgcaagaagcgaccgggagattgaagattatagaagatctaaagaa
atcaaggtgcaaggtcgtggtgttcctagaccagtgacctcctttgaggaagcagggttc
cccgaatacttgatggctaccatccgggcccaaggcttcgctgctccaactccgattcag
tgccaagcgtggcctatggctttgagcggtcgcgatgtggtggctatcgctcagacaggt
agtggaaagacaatttctttcgctcttcctgccatgctacatatcaatgcccaacctttg
ttagaaccaggtgatggtcccatcgctttggtactggccccgactcgtgaattagcggtc
caaattcaacaggagtgcaccaagtttggctccaactctcgtatccgtaacaccgcgatc
tacggtggtgcccctaaaggtcctcaaattcgtgatctccagcggggtgttgaggtcgtt
attgctacacccggccgtcttatagacatgttggagacaaacaagaccaatcttcgtcga
gttacgtaccttgtgatggacgaagccgatcgcatgcttgacatgggttttgaaccccaa
atccgcaagattgtcgggcagattcgacccgatcgtcaaacgctcatgttcagtgctacg
tggcctaaggatgtacagaaattggctaacgactttcttcgagactttattcaatgtaac
attggttccatggagctcactgccaaccacaatatcacacaaattattgaagtttgcagc
gactttgaaaagcgcaacaagctcatcaaccacctggagaaaatagcttctgaggacgcg
aaggttctaatattcgttgccactaagcgggtagcagatgatataaccaagtacctccgt
caagatggttggcctgcacttgccattcatggtgacaaagaacaacgcgagcgtgattgg
gttttgagcgagtttaaagctggccggtcgcctatcctcatcgccacagacgtcgcgtct
cgtgggcttgatgtgaaggatgtcagatacgtgattaactatgatttcccaaacaactgc
gaggactacatccatcgtatcggtcgaactggacgtgctggcttgacgggaacgtcgtat
acgtactttactacagagaacgccaagtccgctcgtgaactagtaggcattcttcgagag
gcgaaggcaaatgtacctcctcaacttgaagaaatgatcatgattggtggaggtggcggt
ggcaggagccgattcggcgctagtcgcggtcgtggaggcggtcgtggaggtggaggtgga
ggtggaggtggaggcaatcgttatggtggtgacagtggttggagcggacgcagcgaccgc
tggtga
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